RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 LRRC17Q8N6Y2 441 aa12.67□□□□□ -0.38
CHRNA1-204ENST00000409323 OR4K5Q8NGD3 323 aa12.67□□□□□ -0.38
CHRNA1-204ENST00000409323 OR4C15Q8NGM1 316 aa12.67□□□□□ -0.38
CHRNA1-204ENST00000409323 OR10D3Q8NH80 312 aa12.67□□□□□ -0.38
CHRNA1-204ENST00000409323 POP5Q969H6 163 aaKnown RBP12.67□□□□□ -0.38
CHRNA1-204ENST00000409323 FAM46AQ96IP4 442 aaKnown RBP12.67□□□□□ -0.38
CHRNA1-204ENST00000409323 MOGAT1Q96PD6 335 aa12.67□□□□□ -0.38
CHRNA1-204ENST00000409323 FUZQ9BT04 418 aa12.67□□□□□ -0.38
CHRNA1-204ENST00000409323 PTDSS2Q9BVG9 487 aa12.67□□□□□ -0.38
CHRNA1-204ENST00000409323 POLR2J2Q9GZM3 115 aaKnown RBP12.67□□□□□ -0.38
CHRNA1-204ENST00000409323 POLR2J3Q9H1A7 115 aaKnown RBP12.67□□□□□ -0.38
CHRNA1-204ENST00000409323 DNAJB9Q9UBS3 223 aa12.67□□□□□ -0.38
CHRNA1-204ENST00000409323 AP4B1Q9Y6B7 739 aa12.67□□□□□ -0.38
CHRNA1-204ENST00000409323 NBASA2RRP1 2371 aa12.67□□□□□ -0.38
CHRNA1-204ENST00000409323 SMG1Q96Q15 3661 aaKnown RBP12.67□□□□□ -0.38
CHRNA1-204ENST00000409323 SH3PXD2BA1X283 911 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 OR10H3O60404 316 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 DEAF1O75398 565 aaPredicted RBP12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 ACTL6AO96019 429 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 IFI30P13284 250 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 MAKP20794 623 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 FPR1P21462 350 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 LIMS1P48059 325 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 PTDSS1P48651 473 aaKnown RBP12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 DIO1P49895 249 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 OR2B6P58173 313 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 TLE1Q04724 770 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 KRTCAP3Q53RY4 240 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 NHSL2Q5HYW2 709 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 RPRMLQ8N4K4 120 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 ACOT11Q8WXI4 607 aaPredicted RBP12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 ROBO4Q8WZ75 1007 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 MPP4Q96JB8 637 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 TUBA1CQ9BQE3 449 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 ZNF426Q9BUY5 554 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 C12orf10Q9HB07 376 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 C6orf203Q9P0P8 240 aaPredicted RBP12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 TINAGQ9UJW2 476 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 MED31Q9Y3C7 131 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 SPIN1Q9Y657 262 aaPredicted RBP12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 KALRNO60229 2985 aa12.66□□□□□ -0.38
CHRNA1-204ENST00000409323 ZNF814B7Z6K7 855 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 SULT2B1O00204 365 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 ZNF208O43345 1280 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 NPIPB7O75200 414 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 AKR7A3O95154 331 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 AHSA1O95433 338 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 THRBP10828 461 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 ZNF23P17027 643 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 IDUAP35475 653 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 SGCBQ16585 318 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 EMC4Q5J8M3 183 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 WLSQ5T9L3 541 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 NCCRP1Q6ZVX7 275 aaPredicted RBP12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 RRM2BQ7LG56 351 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 MEIOBQ8N635 442 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 OR2V1Q8NHB1 315 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 SLC25A43Q8WUT9 341 aaPredicted RBP12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 NRG4Q8WWG1 115 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 OSTF1Q92882 214 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 SARAFQ96BY9 339 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 ADGRG7Q96K78 797 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 UCN2Q96RP3 112 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 GPA33Q99795 319 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 TMEM43Q9BTV4 400 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 PDP1Q9P0J1 537 aaPredicted RBP12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 TMCC3Q9ULS5 477 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 LRRC42Q9Y546 428 aa12.65□□□□□ -0.38
CHRNA1-204ENST00000409323 TRAV36DV7A0A075B6V5 113 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 EIF4E1BA6NMX2 242 aaKnown RBP12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 PDLIM1O00151 329 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 RAMP1O60894 148 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 CCNB2O95067 398 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 EDN3P14138 238 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 ENPP1P22413 925 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 CARD18P57730 90 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 SMIM11AP58511 58 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 OTUD3Q5T2D3 398 aaPredicted RBP12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 TMPPEQ6ZT21 453 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 ESPNLQ6ZVH7 1005 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 MBOAT2Q6ZWT7 520 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 PQLC1Q8N2U9 271 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 KDM8Q8N371 416 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 LSM14AQ8ND56 463 aaKnown RBP12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 STK35Q8TDR2 534 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 GTPBP3Q969Y2 492 aaKnown RBP12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 BPIFA2Q96DR5 249 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 TRIB1Q96RU8 372 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 EPYCQ99645 322 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 KLHL13Q9P2N7 655 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 OAZ3Q9UMX2 235 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 LIPT2A6NK58 231 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 GJE1A6NN92 205 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 CLCA1A8K7I4 914 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 B8ZZF3 427 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 LINC01387J3KSC0 135 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 CDC42EP2O14613 210 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 SLC19A2O60779 497 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 BGLAPP02818 100 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 FCGR1AP12314 374 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms