RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 YTHDF3Q7Z739 585 aaKnown RBP8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 HMGN2P46Q86SG4 172 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 DEPDC4Q8N2C3 294 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 C17orf78Q8N4C9 275 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 POMGNT2Q8NAT1 580 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 WFDC11Q8NEX6 87 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 OR9I1Q8NGQ6 314 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 AKAP1Q92667 903 aaKnown RBP eCLIP8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 GTF2H4Q92759 462 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 VPS33AQ96AX1 596 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 ZG16BQ96DA0 208 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 SPDL1Q96EA4 605 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 PERPQ96FX8 193 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 ARL5BQ96KC2 179 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 OR11A1Q9GZK7 315 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 ALG2Q9H553 416 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 MOV10Q9HCE1 1003 aaKnown RBP8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 DLL4Q9NR61 685 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 SELENONQ9NZV5 590 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 DCTN4Q9UJW0 460 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 ING1Q9UK53 422 aaPredicted RBP8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 SLC13A4Q9UKG4 626 aa8.04□□□□□ -1.12
SNORD88A-201ENST00000408314 ARID1AO14497 2285 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 A0A1W2PP18 115 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 TMEM72A0PK05 275 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 AKAP8O43823 692 aaKnown RBP8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 OR2T1O43869 369 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 SERPINB7O75635 380 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 LYZL6O75951 148 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 PGM3O95394 542 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 PTAFRP25105 342 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 PRKAR1BP31321 381 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 PTH2RP49190 550 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 IDH3AP50213 366 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 H3F3AP84243 136 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 OTUD3Q5T2D3 398 aaPredicted RBP8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 REEP3Q6NUK4 255 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 SLC2A7Q6PXP3 512 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 BLOC1S3Q6QNY0 202 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 VRK2Q86Y07 508 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 ZNF433Q8N7K0 673 aaPredicted RBP8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 STK35Q8TDR2 534 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 TMEM45BQ96B21 275 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 ZNF524Q96C55 264 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 MAGEB18Q96M61 343 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 ZNF607Q96SK3 696 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 ADAM19Q9H013 955 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 PAIP1Q9H074 479 aaKnown RBP8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 C12orf10Q9HB07 376 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 BARX1Q9HBU1 254 aaPredicted RBP8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 CCDC167Q9P0B6 97 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 TESQ9UGI8 421 aaKnown RBP8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 PRSS50Q9UI38 385 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 RASD1Q9Y272 281 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 AMDHD2Q9Y303 409 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 PCDHB14Q9Y5E9 798 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 FLVCR1Q9Y5Y0 555 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 GMEB1Q9Y692 573 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 DSCAMO60469 2012 aa8.03□□□□□ -1.12
SNORD88A-201ENST00000408314 RAI1Q7Z5J4 1906 aaPredicted RBP8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 LIPT2A6NK58 231 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 AQP7P3A6NL99 342 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 ELOA3DA6NLF2 546 aaPredicted RBP8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 ANGPT2O15123 496 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 ADAM11O75078 769 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 BCAS1O75363 584 aaPredicted RBP8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 RAD51DO75771 328 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 KRT33AO76009 404 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 WNT11O96014 354 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 GKN3PP0CG01 181 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 ARAFP10398 606 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 PNMTP11086 282 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 IMPDH2P12268 514 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 BMP4P12644 408 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 IGHV1-2P23083 117 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 SLC6A2P23975 617 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 CDH11P55287 796 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 ATP5J2P56134 94 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 CDK6Q00534 326 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 PLAURQ03405 335 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 BSPH1Q075Z2 132 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 CEACAM7Q14002 265 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 MFSD13AQ14CX5 517 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 OR7A5Q15622 319 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 KRTAP21-3Q3LHN1 58 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 ELOA3BQ3SY89 546 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 ZNF672Q499Z4 452 aaPredicted RBP8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 GTDC1Q4AE62 458 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 AGKQ53H12 422 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 C1orf140Q5VVS0 124 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 TMEM225Q6GV28 225 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 C22orf34Q6ZV56 151 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 AAED1Q7RTV5 226 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 SLC30A8Q8IWU4 369 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 ELOA3Q8NG57 546 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 TSPEARQ8WU66 669 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 DNAJA4Q8WW22 397 aaPredicted RBP8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 AURKBQ96GD4 344 aaPredicted RBP8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 COX4I2Q96KJ9 171 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 Q96MF0 132 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms