RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 MED11Q9P086 117 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 AASSQ9UDR5 926 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 TMED7Q9Y3B3 224 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 SNTNA6NMZ2 147 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 PTP4A3O75365 173 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 TFAP2AP05549 437 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 FUT1P19526 365 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 GRK5P34947 590 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 APOBEC1P41238 236 aaKnown RBP19.05■□□□□ 0.64
TPM1-208ENST00000404484 MAP2K6P52564 334 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 SLC35A2P78381 396 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 LY6DQ14210 128 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 OCLNQ16625 522 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 TMEM44Q2T9K0 475 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 OR5M10Q6IEU7 315 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 BORAQ6PGQ7 559 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 TCEANCQ8N8B7 351 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 EXD3Q8N9H8 876 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 CLEC1AQ8NC01 280 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 LSM14AQ8ND56 463 aaKnown RBP19.05■□□□□ 0.64
TPM1-208ENST00000404484 STK35Q8TDR2 534 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 IL4I1Q96RQ9 567 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 KLHDC3Q9BQ90 382 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 LHPPQ9H008 270 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 UBQLN3Q9H347 655 aa19.05■□□□□ 0.64
TPM1-208ENST00000404484 TRAV36DV7A0A075B6V5 113 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 DPPA5A6NC42 116 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 C2orf72A6NCS6 295 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 PTGES3LE9PB15 166 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 M0R129 80 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 MASP2O00187 686 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 ETV2O00321 342 aaPredicted RBP19.04■□□□□ 0.64
TPM1-208ENST00000404484 CDK2AP1O14519 115 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 SUSD5O60279 629 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 NDUFB2O95178 105 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 SNX4O95219 450 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 CH25HO95992 272 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 PRKCAP17252 672 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 ZNF74Q16587 644 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 SMN1Q16637 294 aaKnown RBP19.04■□□□□ 0.64
TPM1-208ENST00000404484 SLC46A3Q7Z3Q1 461 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 C10orf53Q8N6V4 93 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 OR2M3Q8NG83 312 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 OR4Q3Q8NH05 313 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 OR51A7Q8NH64 312 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 TMEM163Q8TC26 289 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 PSMF1Q92530 271 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 MYDGFQ969H8 173 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 MRGPRX4Q96LA9 322 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 NDUFA13Q9P0J0 144 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 SPTA1P02549 2419 aa19.04■□□□□ 0.64
TPM1-208ENST00000404484 TLN1Q9Y490 2541 aaKnown RBP19.04■□□□□ 0.64
TPM1-208ENST00000404484 TRAV27A0A087WT01 109 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 A0A087WZY1 265 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 A8MVM7 634 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 TLX2O43763 284 aaPredicted RBP19.03■□□□□ 0.64
TPM1-208ENST00000404484 PRKYO43930 277 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 FAM87AP0C7U9 286 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 CASRP41180 1078 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 RRADP55042 308 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 PRPS1P60891 318 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 SLC25A53Q5H9E4 307 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 ABHD17BQ5VST6 288 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 PRAMEF20Q5VT98 475 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 PLCZ1Q86YW0 608 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 LNX2Q8N448 690 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 FADS6Q8N9I5 356 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 THAP4Q8WY91 577 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 ZNF524Q96C55 264 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 ARHGAP9Q9BRR9 750 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 IFT27Q9BW83 186 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 FKRPQ9H9S5 495 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 NANSQ9NR45 359 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 CNOT2Q9NZN8 540 aaKnown RBP19.03■□□□□ 0.64
TPM1-208ENST00000404484 PSORS1C1Q9UIG5 152 aa19.03■□□□□ 0.64
TPM1-208ENST00000404484 PCSK5Q92824 1860 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 EFCAB10A6NFE3 127 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 CLCA1A8K7I4 914 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 M0R3G1 203 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 SURF4O15260 269 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 RGS10O43665 173 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 MT-ATP6P00846 226 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 P04436 131 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 CCL3P10147 92 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 CYB561P49447 251 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 FXYD6P3P58550 94 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 EFNB1P98172 346 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 EGR4Q05215 589 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 B3GNTL1Q67FW5 361 aaPredicted RBP19.02■□□□□ 0.64
TPM1-208ENST00000404484 POMZP3Q6PJE2 187 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 ADGRG3Q86Y34 549 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 SVOPQ8N4V2 548 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 TNFRSF13CQ96RJ3 184 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 FAM192AQ9GZU8 254 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 MCCC2Q9HCC0 563 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 ZNF229Q9UJW7 825 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 POLHQ9Y253 713 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 KCNMB2Q9Y691 235 aa19.02■□□□□ 0.64
TPM1-208ENST00000404484 BHLHE40O14503 412 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 SNPHO15079 494 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms