RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 TIAL1Q01085 375 aaKnown RBP eCLIP13.57□□□□□ -0.241e-6■■□□□ 11.5
RPRD1A-202ENST00000399022 CCNJQ5T5M9 372 aa13.57□□□□□ -0.24
RPRD1A-202ENST00000399022 CMIPQ8IY22 773 aa13.57□□□□□ -0.24
RPRD1A-202ENST00000399022 ZBTB8AQ96BR9 441 aa13.57□□□□□ -0.24
RPRD1A-202ENST00000399022 VRK1Q99986 396 aaPredicted RBP13.57□□□□□ -0.24
RPRD1A-202ENST00000399022 CASC3O15234 703 aaKnown RBP13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 RRASP10301 218 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 IL12BP29460 328 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 GJA4P35212 333 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 TCTN3Q6NUS6 607 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 FAAP20Q6NZ36 180 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 Q6ZNB5 142 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 CCDC71Q8IV32 467 aaPredicted RBP13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 TSTD1Q8NFU3 115 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 OR10R2Q8NGX6 335 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 OR52I2Q8NH67 350 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 SPPL3Q8TCT6 385 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 LYSMD1Q96S90 227 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 C1QTNF2Q9BXJ5 285 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 PLEKHA1Q9HB21 404 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 DZANK1Q9NVP4 752 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 PRRT4C9JH25 899 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 ZNF878C9JN71 531 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 CD160O95971 181 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 CCKBRP32239 447 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 PRDX1Q06830 199 aaKnown RBP13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 TANGO2Q6ICL3 276 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 FIGLAQ6QHK4 219 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 CHTF18Q8WVB6 975 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 MOAP1Q96BY2 351 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 TBC1D20Q96BZ9 403 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 MMABQ96EY8 250 aaPredicted RBP13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 PHB2Q99623 299 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 RXFP3Q9NSD7 469 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 TCRBV21S2A2A0A5A6 115 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 PVRP15151 417 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 CTRB1P17538 263 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 CBX5P45973 191 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 ENTPD8Q5MY95 495 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 CTRB2Q6GPI1 263 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 LAIR2Q6ISS4 152 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 DUSP18Q8NEJ0 188 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 OR5AK2Q8NH90 309 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 C16orf58Q96GQ5 468 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 MSLNLQ96KJ4 702 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 OR14A2Q96R54 314 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 MICU1Q9BPX6 476 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 MED18Q9BUE0 208 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 PAPPA2Q9BXP8 1791 aa13.56□□□□□ -0.24
RPRD1A-202ENST00000399022 SLC5A10A0PJK1 596 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 LINC00862A6NCI5 91 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 SULT1C2O00338 296 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 FOXE1O00358 373 aaPredicted RBP13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 IFNA17P01571 189 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 HLA-AP01891 365 aaKnown RBP13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 ZNF888P0CJ79 500 aaPredicted RBP13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 INSL4Q14641 139 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 ZNF750Q32MQ0 723 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 FBXO46Q6PJ61 603 aaPredicted RBP13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 GLB1L2Q8IW92 636 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 CSNK1A1LQ8N752 337 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 SCGB3A2Q96PL1 93 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 APOOQ9BUR5 198 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 VN1R3Q9BXE9 311 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 MIXL1Q9H2W2 232 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 PLEKHB1Q9UF11 243 aaPredicted RBP13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 NPFFR2Q9Y5X5 522 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 CDHR4A6H8M9 788 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 LGI1O95970 557 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 PET100P0DJ07 73 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 HIST1H1TP22492 207 aaPredicted RBP13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 METAP1P53582 386 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 CXADRP78310 365 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 ZNF385BQ569K4 471 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 UBE2NLQ5JXB2 153 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 LAIR1Q6GTX8 287 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 SLC35F2Q8IXU6 374 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 TMEFF1Q8IYR6 380 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 TMEM239Q8WW34 195 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 GCDHQ92947 438 aaPredicted RBP13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 C3orf49Q96BT1 292 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 STARD5Q9NSY2 213 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 OR51B4Q9Y5P0 310 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 TRAV27A0A087WT01 109 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 LOC105371267A0A1B0GV96 52 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 GGT3PA6NGU5 568 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 LDB3O75112 727 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 SOD1P00441 154 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 RAB6AP20340 208 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 HTR1FP30939 366 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 IL13RA1P78552 427 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 GRM7Q14831 915 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 RAB11BQ15907 218 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 PDSS1Q5T2R2 415 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 SSX9Q7RTT3 188 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 TMEM150AQ86TG1 271 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 CD163Q86VB7 1156 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 OR10Z1Q8NGY1 313 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 LMX1AQ8TE12 382 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms