RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 FKRPQ9H9S5 495 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 TBCCD1Q9NVR7 557 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 SPHK1Q9NYA1 384 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 ZNF337Q9Y3M9 751 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 NCR1O76036 304 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 ATXN1LP0C7T5 689 aaKnown RBP13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 AGTR1P30556 359 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 RAB38P57729 211 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 ZXDAP98168 799 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 RAB31Q13636 194 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 WBP2NLQ6ICG8 309 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 FBXW12Q6X9E4 464 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 SMRP1Q8NCR6 262 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 OR5M1Q8NGP8 315 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 STK35Q8TDR2 534 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 ZNF707Q96C28 371 aaPredicted RBP13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 PBDC1Q9BVG4 233 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 MMP28Q9H239 520 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 UBQLN4Q9NRR5 601 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 TESQ9UGI8 421 aaKnown RBP13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 POLR2AP24928 1970 aaKnown RBP13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 CASC3O15234 703 aaKnown RBP13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 KCNK5O95279 499 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 HEXAP06865 529 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 CARD18P57730 90 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 RUNX2Q13950 521 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 TRNP1Q6NT89 227 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 BORAQ6PGQ7 559 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 CD163Q86VB7 1156 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 ADAMTS16Q8TE57 1224 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 PRRC1Q96M27 445 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 ASF1BQ9NVP2 202 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 TMEM45AQ9NWC5 275 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 ARHGAP33O14559 1287 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 SPDEFO95238 335 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 IVDP26440 423 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 PAPD4Q6PIY7 484 aaKnown RBP13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 VN1R3Q9BXE9 311 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 AGPAT4Q9NRZ5 378 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 IL37Q9NZH6 218 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 GHRLQ9UBU3 117 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 EDARQ9UNE0 448 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 MAGED1Q9Y5V3 778 aaPredicted RBP13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 MEGF11A6BM72 1044 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 TRAPPC2LH3BP13 241 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 H7C1C5 153 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 DENRO43583 198 aaKnown RBP13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 POU2F2P09086 479 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 TMEM11P17152 192 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 MYF6P23409 242 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 MAGEA6P43360 314 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 LCN6P62502 163 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 CAMK2DQ13557 499 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 CPZQ66K79 652 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 OR7E24Q6IFN5 339 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 PODNL1Q6PEZ8 512 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 CADM4Q8NFZ8 388 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 C3orf30Q96M34 536 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 RLIMQ9NVW2 624 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 AIFM1O95831 613 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 CRHBPP24387 322 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 CD79BP40259 229 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 PCBD1P61457 104 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 B3GNT7Q8NFL0 401 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 MICU1Q9BPX6 476 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 HIPK2Q9H2X6 1198 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 PRICKLE3O43900 615 aaPredicted RBP13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 SLC22A5O76082 557 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 ELP2Q6IA86 826 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 CNIH2Q6PI25 160 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 ACBD4Q8NC06 268 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 RAB39BQ96DA2 213 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 AMDHD1Q96NU7 426 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 SMIM3Q9BZL3 60 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 OR52D1Q9H346 318 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 SDR39U1Q9NRG7 319 aaPredicted RBP13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 TMEM269A0A1B0GVZ9 245 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 B4GAT1O43505 415 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 GPR75O95800 540 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 PPP2CBP62714 309 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 PPP2CAP67775 309 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 RIPPLY1Q0D2K3 151 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 ACSM3Q53FZ2 586 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 AFMIDQ63HM1 303 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 TECPR1Q7Z6L1 1165 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 EGLN2Q96KS0 407 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 LMF2Q9BU23 707 aaKnown RBP13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 OLAHQ9NV23 265 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 SNX11Q9Y5W9 270 aa13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 MYO5AQ9Y4I1 1855 aaKnown RBP13.23□□□□□ -0.29
PCDHA11-201ENST00000398640 TRGV8A0A0C4DH27 118 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 ZNF736B4DX44 427 aaPredicted RBP13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 STK17BO94768 372 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 MAOAP21397 527 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 CDK5R2Q13319 367 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 HBMQ6B0K9 141 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 SLC15A4Q8N697 577 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 KIAA1958Q8N8K9 716 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 ZNF417Q8TAU3 575 aa13.22□□□□□ -0.29
PCDHA11-201ENST00000398640 SLC30A3Q99726 388 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms