RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 SLC10A1Q14973 349 aa2.54□□□□□ -2
CHD9-202ENST00000398510 SSX2Q16385 188 aa2.54□□□□□ -2
CHD9-202ENST00000398510 C14orf28Q4W4Y0 310 aa2.54□□□□□ -2
CHD9-202ENST00000398510 ZNF789Q5FWF6 425 aa2.54□□□□□ -2
CHD9-202ENST00000398510 WDR74Q6RFH5 385 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 TIFABQ6ZNK6 161 aa2.54□□□□□ -2
CHD9-202ENST00000398510 RETREG3Q86VR2 466 aa2.54□□□□□ -2
CHD9-202ENST00000398510 COMMD7Q86VX2 200 aa2.54□□□□□ -2
CHD9-202ENST00000398510 SPPL2CQ8IUH8 684 aa2.54□□□□□ -2
CHD9-202ENST00000398510 CNEP1R1Q8N9A8 125 aa2.54□□□□□ -2
CHD9-202ENST00000398510 UBTD2Q8WUN7 234 aa2.54□□□□□ -2
CHD9-202ENST00000398510 ST8SIA2Q92186 375 aa2.54□□□□□ -2
CHD9-202ENST00000398510 SGTBQ96EQ0 304 aa2.54□□□□□ -2
CHD9-202ENST00000398510 SLC35A4Q96G79 324 aa2.54□□□□□ -2
CHD9-202ENST00000398510 PDLIM5Q96HC4 596 aaKnown RBP2.54□□□□□ -2
CHD9-202ENST00000398510 MCOLN1Q9GZU1 580 aa2.54□□□□□ -2
CHD9-202ENST00000398510 A4GALTQ9NPC4 353 aa2.54□□□□□ -2
CHD9-202ENST00000398510 SLC2A9Q9NRM0 540 aa2.54□□□□□ -2
CHD9-202ENST00000398510 OCIAD1Q9NX40 245 aa2.54□□□□□ -2
CHD9-202ENST00000398510 PISDQ9UG56 409 aa2.54□□□□□ -2
CHD9-202ENST00000398510 NOCTQ9UK39 431 aaKnown RBP2.54□□□□□ -2
CHD9-202ENST00000398510 ZNF407Q9C0G0 2248 aa2.54□□□□□ -2
CHD9-202ENST00000398510 A0A0A6YYC8 382 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 IGKV6D-41A0A0C4DH26 115 aa2.54□□□□□ -2
CHD9-202ENST00000398510 I3L1I5 382 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 SYT5O00445 386 aa2.54□□□□□ -2
CHD9-202ENST00000398510 CLDN5O00501 218 aa2.54□□□□□ -2
CHD9-202ENST00000398510 ZNF185O15231 689 aa2.54□□□□□ -2
CHD9-202ENST00000398510 RBBP9O75884 186 aa2.54□□□□□ -2
CHD9-202ENST00000398510 TUSC2O75896 110 aa2.54□□□□□ -2
CHD9-202ENST00000398510 BEST1O76090 585 aa2.54□□□□□ -2
CHD9-202ENST00000398510 PTBP1P26599 531 aaKnown RBP eCLIP2.54□□□□□ -21e-7■■■■■ 45.3
CHD9-202ENST00000398510 TNFRSF17Q02223 184 aa2.54□□□□□ -2
CHD9-202ENST00000398510 DSC2Q02487 901 aa2.54□□□□□ -2
CHD9-202ENST00000398510 SCGB2B2Q4G0G5 96 aa2.54□□□□□ -2
CHD9-202ENST00000398510 PLCXD3Q63HM9 321 aa2.54□□□□□ -2
CHD9-202ENST00000398510 CPZQ66K79 652 aa2.54□□□□□ -2
CHD9-202ENST00000398510 POMZP3Q6PJE2 187 aa2.54□□□□□ -2
CHD9-202ENST00000398510 ACBD7Q8N6N7 88 aa2.54□□□□□ -2
CHD9-202ENST00000398510 SLC35G3Q8N808 338 aa2.54□□□□□ -2
CHD9-202ENST00000398510 DCBLD1Q8N8Z6 715 aa2.54□□□□□ -2
CHD9-202ENST00000398510 MRPL43Q8N983 215 aaKnown RBP2.54□□□□□ -2
CHD9-202ENST00000398510 FNDC9Q8TBE3 224 aa2.54□□□□□ -2
CHD9-202ENST00000398510 FAM216AQ8WUB2 273 aa2.54□□□□□ -2
CHD9-202ENST00000398510 SNRNP27Q8WVK2 155 aaKnown RBP2.54□□□□□ -2
CHD9-202ENST00000398510 APOBEC4Q8WW27 367 aaKnown RBP2.54□□□□□ -2
CHD9-202ENST00000398510 DTD2Q96FN9 168 aa2.54□□□□□ -2
CHD9-202ENST00000398510 SLC45A3Q96JT2 553 aa2.54□□□□□ -2
CHD9-202ENST00000398510 TAAR9Q96RI9 348 aa2.54□□□□□ -2
CHD9-202ENST00000398510 DDX31Q9H8H2 851 aaKnown RBP2.54□□□□□ -2
CHD9-202ENST00000398510 XPNPEP1Q9NQW7 623 aa2.54□□□□□ -2
CHD9-202ENST00000398510 CBLCQ9ULV8 474 aa2.54□□□□□ -2
CHD9-202ENST00000398510 KCTD3Q9Y597 815 aa2.54□□□□□ -2
CHD9-202ENST00000398510 CEPT1Q9Y6K0 416 aa2.54□□□□□ -2
CHD9-202ENST00000398510 TRAV17A0A0B4J275 112 aa2.54□□□□□ -2
CHD9-202ENST00000398510 MYOCOSA0A1B0GUC4 107 aa2.54□□□□□ -2
CHD9-202ENST00000398510 CRYM-AS1A6NIL9 109 aa2.54□□□□□ -2
CHD9-202ENST00000398510 MCRIP1C9JLW8 97 aa2.54□□□□□ -2
CHD9-202ENST00000398510 FMO6PO60774 539 aa2.54□□□□□ -2
CHD9-202ENST00000398510 GPR32O75388 356 aa2.54□□□□□ -2
CHD9-202ENST00000398510 CLDN7O95471 211 aa2.54□□□□□ -2
CHD9-202ENST00000398510 DBHP09172 617 aa2.54□□□□□ -2
CHD9-202ENST00000398510 SEC11BP0C7V7 166 aa2.54□□□□□ -2
CHD9-202ENST00000398510 AKAIN1P0CW23 69 aa2.54□□□□□ -2
CHD9-202ENST00000398510 SLC2A1P11166 492 aa2.54□□□□□ -2
CHD9-202ENST00000398510 BCKDHBP21953 392 aa2.54□□□□□ -2
CHD9-202ENST00000398510 AK4P27144 223 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 SSTR1P30872 391 aa2.54□□□□□ -2
CHD9-202ENST00000398510 PIGAP37287 484 aa2.54□□□□□ -2
CHD9-202ENST00000398510 TNFSF9P41273 254 aa2.54□□□□□ -2
CHD9-202ENST00000398510 HK3P52790 923 aa2.54□□□□□ -2
CHD9-202ENST00000398510 BLOC1S1P78537 153 aa2.54□□□□□ -2
CHD9-202ENST00000398510 TMEM267Q0VDI3 215 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 MYBPHQ13203 477 aa2.54□□□□□ -2
CHD9-202ENST00000398510 IZUMO4Q1ZYL8 232 aa2.54□□□□□ -2
CHD9-202ENST00000398510 TMEM30BQ3MIR4 351 aa2.54□□□□□ -2
CHD9-202ENST00000398510 LIPNQ5VXI9 398 aa2.54□□□□□ -2
CHD9-202ENST00000398510 CYP4V2Q6ZWL3 525 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 MED25Q71SY5 747 aa2.54□□□□□ -2
CHD9-202ENST00000398510 OR1L6Q8NGR2 347 aa2.54□□□□□ -2
CHD9-202ENST00000398510 OR6N2Q8NGY6 317 aa2.54□□□□□ -2
CHD9-202ENST00000398510 VSTM2AQ8TAG5 236 aa2.54□□□□□ -2
CHD9-202ENST00000398510 ZCCHC14Q8WYQ9 949 aaKnown RBP2.54□□□□□ -2
CHD9-202ENST00000398510 ZNF681Q96N22 645 aa2.54□□□□□ -2
CHD9-202ENST00000398510 UHRF1Q96T88 793 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 NDNQ99608 321 aa2.54□□□□□ -2
CHD9-202ENST00000398510 IL26Q9NPH9 171 aa2.54□□□□□ -2
CHD9-202ENST00000398510 GKN1Q9NS71 199 aa2.54□□□□□ -2
CHD9-202ENST00000398510 NECAP2Q9NVZ3 263 aa2.54□□□□□ -2
CHD9-202ENST00000398510 EIF2B4Q9UI10 523 aaKnown RBP2.54□□□□□ -2
CHD9-202ENST00000398510 DYSFO75923 2080 aa2.54□□□□□ -2
CHD9-202ENST00000398510 E5RGE8 158 aa2.54□□□□□ -2
CHD9-202ENST00000398510 CD5P06127 495 aa2.54□□□□□ -2
CHD9-202ENST00000398510 CBLP22681 906 aa2.54□□□□□ -2
CHD9-202ENST00000398510 BCL6P41182 706 aa2.54□□□□□ -2
CHD9-202ENST00000398510 NCS1P62166 190 aa2.54□□□□□ -2
CHD9-202ENST00000398510 CRADDP78560 199 aa2.54□□□□□ -2
CHD9-202ENST00000398510 SELENBP1Q13228 472 aa2.54□□□□□ -2
CHD9-202ENST00000398510 P2RY14Q15391 338 aa2.54□□□□□ -2
CHD9-202ENST00000398510 BEND4Q6ZU67 534 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms