RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 ASB18Q6ZVZ8 466 aa12.85□□□□□ -0.35
SKA1-202ENST00000398452 ZER1Q7Z7L7 766 aa12.85□□□□□ -0.35
SKA1-202ENST00000398452 YRDCQ86U90 279 aaKnown RBP12.85□□□□□ -0.35
SKA1-202ENST00000398452 ADGRG3Q86Y34 549 aa12.85□□□□□ -0.35
SKA1-202ENST00000398452 FAM109AQ8N4B1 249 aa12.85□□□□□ -0.35
SKA1-202ENST00000398452 FAM83FQ8NEG4 500 aaPredicted RBP12.85□□□□□ -0.35
SKA1-202ENST00000398452 OR52L1Q8NGH7 329 aa12.85□□□□□ -0.35
SKA1-202ENST00000398452 TEX47Q8TBZ9 253 aa12.85□□□□□ -0.35
SKA1-202ENST00000398452 CYGBQ8WWM9 190 aa12.85□□□□□ -0.35
SKA1-202ENST00000398452 NTNG2Q96CW9 530 aa12.85□□□□□ -0.35
SKA1-202ENST00000398452 ABHD17AQ96GS6 310 aa12.85□□□□□ -0.35
SKA1-202ENST00000398452 FUZQ9BT04 418 aa12.85□□□□□ -0.35
SKA1-202ENST00000398452 ZNF426Q9BUY5 554 aa12.85□□□□□ -0.35
SKA1-202ENST00000398452 ASPNQ9BXN1 380 aa12.85□□□□□ -0.35
SKA1-202ENST00000398452 OR2B2Q9GZK3 357 aa12.85□□□□□ -0.35
SKA1-202ENST00000398452 ZNF703Q9H7S9 590 aaPredicted RBP12.85□□□□□ -0.35
SKA1-202ENST00000398452 NANSQ9NR45 359 aa12.85□□□□□ -0.35
SKA1-202ENST00000398452 ATMQ13315 3056 aa12.85□□□□□ -0.35
SKA1-202ENST00000398452 PINLYPA6NC86 204 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 H3BML4 177 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 HCN1O60741 890 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 OR7A10O76100 309 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 RCBTB2O95199 551 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 OR6A2O95222 327 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 CH25HO95992 272 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 MT-ATP6P00846 226 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 IGF2P01344 180 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 PEPDP12955 493 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 OSMP13725 252 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 FUT1P19526 365 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 MST1P26927 711 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 IDUAP35475 653 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 OMPP47874 163 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 ESRRGP62508 458 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 FOXO1Q12778 655 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 HYAL4Q2M3T9 481 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 ZIK1Q3SY52 487 aaPredicted RBP12.84□□□□□ -0.35
SKA1-202ENST00000398452 SYT14P1Q58G82 188 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 WIPI1Q5MNZ9 446 aaPredicted RBP12.84□□□□□ -0.35
SKA1-202ENST00000398452 FAM69AQ5T7M9 428 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 C1orf140Q5VVS0 124 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 ZNF770Q6IQ21 691 aaPredicted RBP12.84□□□□□ -0.35
SKA1-202ENST00000398452 TMPRSS11FQ6ZWK6 438 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 MAMDC2Q7Z304 686 aaPredicted RBP12.84□□□□□ -0.35
SKA1-202ENST00000398452 OAFQ86UD1 273 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 P3H2Q8IVL5 708 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 PARP8Q8N3A8 854 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 TMEM251Q8N6I4 163 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 ZFP62Q8NB50 900 aaPredicted RBP12.84□□□□□ -0.35
SKA1-202ENST00000398452 OR5M1Q8NGP8 315 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 SMPDL3BQ92485 455 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 SLC25A36Q96CQ1 311 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 NIPSNAP1Q9BPW8 284 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 POTEKPQ9BYX7 375 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 PRRG3Q9BZD7 231 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 ADNPQ9H2P0 1102 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 TUBD1Q9UJT1 453 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 RAB26Q9ULW5 256 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 B3GNT3Q9Y2A9 372 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 ZNF337Q9Y3M9 751 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 CFAP46Q8IYW2 2715 aa12.84□□□□□ -0.35
SKA1-202ENST00000398452 OR2M5A3KFT3 312 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 SHISA8B8ZZ34 492 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 CRYABP02511 175 aaKnown RBP12.83□□□□□ -0.36
SKA1-202ENST00000398452 HPNP05981 417 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 RFPL3SP0C7P2 107 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 POU3F2P20265 443 aaPredicted RBP12.83□□□□□ -0.36
SKA1-202ENST00000398452 FUT4P22083 530 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 SFTPDP35247 375 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 MAGEA5P43359 124 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 RPS5P46782 204 aaKnown RBP12.83□□□□□ -0.36
SKA1-202ENST00000398452 RAC1P63000 192 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 NFATC3Q12968 1075 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 INAQ16352 499 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 ANKDD1AQ495B1 522 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 CD300LDQ6UXZ3 194 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 Q6ZS92 163 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 RASSF6Q6ZTQ3 369 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 NANOGNBQ7Z5D8 188 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 EXD3Q8N9H8 876 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 OR6S1Q8NH40 331 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 POC1BQ8TC44 478 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 FANK1Q8TC84 345 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 OSTF1Q92882 214 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 ZHX1-C8orf76Q96EF9 292 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 WBP1Q96G27 269 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 OR5B2Q96R09 309 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 KLHDC3Q9BQ90 382 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 ADI1Q9BV57 179 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 UBQLN3Q9H347 655 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 TOR3AQ9H497 397 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 TMEM185BQ9H7F4 350 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 FKRPQ9H9S5 495 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 MEPEQ9NQ76 525 aaPredicted RBP12.83□□□□□ -0.36
SKA1-202ENST00000398452 TBC1D23Q9NUY8 699 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 TP53TG5Q9Y2B4 290 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 HDGFL3Q9Y3E1 203 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 CSAG2Q9Y5P2 127 aa12.83□□□□□ -0.36
SKA1-202ENST00000398452 FLNBO75369 2602 aaKnown RBP12.83□□□□□ -0.36
SKA1-202ENST00000398452 SPTA1P02549 2419 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms