RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 HCFC1P51610 2035 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 RIF1Q5UIP0 2472 aaKnown RBP3.4□□□□□ -1.87
UBE3A-202ENST00000397954 A0A0G2JPF8 293 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 NCF1BA6NI72 391 aaPredicted RBP3.4□□□□□ -1.87
UBE3A-202ENST00000397954 NCF1CA8MVU1 366 aaPredicted RBP3.4□□□□□ -1.87
UBE3A-202ENST00000397954 HNRNPCL2B2RXH8 293 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 HNRNPCL3B7ZW38 293 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 WIPF1O43516 503 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 KIAA0513O60268 411 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 EIF1BO60739 113 aaKnown RBP3.4□□□□□ -1.87
UBE3A-202ENST00000397954 MITFO75030 526 aaPredicted RBP3.4□□□□□ -1.87
UBE3A-202ENST00000397954 VAMP5O95183 116 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 IFNA14P01570 189 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 DBIP07108 87 aaKnown RBP3.4□□□□□ -1.87
UBE3A-202ENST00000397954 IL3P08700 152 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 HNRNPCL4P0DMR1 293 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 NCF1P14598 390 aaPredicted RBP3.4□□□□□ -1.87
UBE3A-202ENST00000397954 SDC1P18827 310 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 ATP6V1C1P21283 382 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 TUBG1P23258 451 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 ZNF81P51508 661 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 ATP12AP54707 1039 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 NAGLUP54802 743 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 CBFBQ13951 182 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 MSMPQ1L6U9 139 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 NADK2Q4G0N4 442 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 LIN52Q52LA3 116 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 C6orf136Q5SQH8 315 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 MFSD12Q6NUT3 480 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 DHRS4L2Q6PKH6 230 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 LANCL3Q6ZV70 420 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 GPAT4Q86UL3 456 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 C10orf107Q8IVU9 208 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 ARHGAP24Q8N264 748 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 OR6K3Q8NGY3 331 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 LILRB4Q8NHJ6 448 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 MAGEE2Q8TD90 523 aaPredicted RBP3.4□□□□□ -1.87
UBE3A-202ENST00000397954 RNASE8Q8TDE3 154 aaKnown RBP3.4□□□□□ -1.87
UBE3A-202ENST00000397954 ST8SIA2Q92186 375 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 RND1Q92730 232 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 TSLPQ969D9 159 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 CPNE4Q96A23 557 aaPredicted RBP3.4□□□□□ -1.87
UBE3A-202ENST00000397954 OMA1Q96E52 524 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 ZHX1-C8orf76Q96EF9 292 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 PHF21BQ96EK2 531 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 NPAS2Q99743 824 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 DUSP26Q9BV47 211 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 POTEKPQ9BYX7 375 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 SLC19A3Q9BZV2 496 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 DPY30Q9C005 99 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 ZNF350Q9GZX5 532 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 OR51B5Q9H339 312 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 WDR55Q9H6Y2 383 aaPredicted RBP3.4□□□□□ -1.87
UBE3A-202ENST00000397954 SDR39U1Q9NRG7 319 aaPredicted RBP3.4□□□□□ -1.87
UBE3A-202ENST00000397954 TUBG2Q9NRH3 451 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 SERINC1Q9NRX5 453 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 FAM30AQ9NZY2 134 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 SLC17A6Q9P2U8 582 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 FBXW2Q9UKT8 454 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 FAF1Q9UNN5 650 aaPredicted RBP3.4□□□□□ -1.87
UBE3A-202ENST00000397954 ERVK-19Q9WJR5 959 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 NTNG1Q9Y2I2 539 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 DNAJC15Q9Y5T4 150 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 DSPPQ9NZW4 1301 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 C5orf42Q9H799 3197 aa3.4□□□□□ -1.87
UBE3A-202ENST00000397954 RNF103-CHMP3A0A140T963 221 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 A0A1W2PPM1 405 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 CGB1A6NKQ9 187 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 C4orf51C9J302 202 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 NPIPB9F8W1W9 429 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 H3BSA7 217 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 FFAR3O14843 346 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 GPR42O15529 346 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 SPRY2O43597 315 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 SLC19A2O60779 497 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 EEDO75530 441 aaKnown RBP3.39□□□□□ -1.87
UBE3A-202ENST00000397954 STX11O75558 287 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 ETHE1O95571 254 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 NTN1O95631 604 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 PMS2P2O95744 297 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 TROVE2P10155 538 aaKnown RBP eCLIP3.39□□□□□ -1.87
UBE3A-202ENST00000397954 ABOP16442 354 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 ZNF708P17019 499 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 PGCP20142 388 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 MAOAP21397 527 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 EVI2BP34910 448 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 ARL1P40616 181 aaPredicted RBP3.39□□□□□ -1.87
UBE3A-202ENST00000397954 CASP3P42574 277 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 GDF5P43026 501 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 P2RX1P51575 399 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 NCBP2P52298 156 aaKnown RBP eCLIP3.39□□□□□ -1.87
UBE3A-202ENST00000397954 CDH13P55290 713 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 CSNK2A1P68400 391 aaPredicted RBP3.39□□□□□ -1.87
UBE3A-202ENST00000397954 ADORA2A-AS1P86434 159 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 MAT1AQ00266 395 aaKnown RBP3.39□□□□□ -1.87
UBE3A-202ENST00000397954 HMGCS1Q01581 520 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 PLGLB1Q02325 96 aa3.39□□□□□ -1.87
UBE3A-202ENST00000397954 CRYZQ08257 329 aaKnown RBP3.39□□□□□ -1.87
UBE3A-202ENST00000397954 GOLGA4Q13439 2230 aaKnown RBP3.39□□□□□ -1.87
UBE3A-202ENST00000397954 ARL13AQ5H913 290 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms