RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 AP1M2Q9Y6Q5 423 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 TDRD6O60522 2096 aaKnown RBP4.65□□□□□ -1.66
SSR1-202ENST00000397511 TSPAN11A1L157 253 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 FAM221BA6H8Z2 402 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 DBX1A6NMT0 343 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 ZNF729A6NN14 1252 aaPredicted RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 FAAHO00519 579 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 TO15178 435 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 SIGLEC5O15389 551 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 MAGEB4O15481 346 aaPredicted RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 PRKNO60260 465 aaPredicted RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 RAD1O60671 282 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 PRAF2O60831 178 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 LDB3O75112 727 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 GYPBP06028 91 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 ASGR2P07307 311 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 RNF224P0DH78 156 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 GABRA1P14867 456 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 PAICSP22234 425 aaKnown RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 ATP5A1P25705 553 aaKnown RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 NTSP30990 170 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 PDX1P52945 283 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 WNT4P56705 351 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 RAP2BP61225 183 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 FABP5Q01469 135 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 DEFA6Q01524 100 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 PRDX1Q06830 199 aaKnown RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 TGM3Q08188 693 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 SIGLEC14Q08ET2 396 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 SMCO1Q147U7 214 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 RNF212Q495C1 297 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 FAM74A1Q5RGS3 127 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 FAM27D1Q5T7N8 215 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 ELP2Q6IA86 826 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 KIAA1211LQ6NV74 962 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 GSG1LQ6UXU4 331 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 LRRC28Q86X40 367 aaPredicted RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 KLBQ86Z14 1044 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 ZFP82Q8N141 532 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 WDSUB1Q8N9V3 476 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 NUP43Q8NFH3 380 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 DMBX1Q8NFW5 382 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 OR5M9Q8NGP3 310 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 SUN3Q8TAQ9 357 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 WDR34Q96EX3 536 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 SENP5Q96HI0 755 aaPredicted RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 ZNF514Q96K75 400 aaPredicted RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 CAMK1GQ96NX5 476 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 PFDN5Q99471 154 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 TMPRSS13Q9BYE2 586 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 SLC6A20Q9NP91 592 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 ADAP2Q9NPF8 381 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 STARD5Q9NSY2 213 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 RPS6KB2Q9UBS0 482 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 KCND3Q9UK17 655 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 DSPPQ9NZW4 1301 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 C17orf113A0A1B0GUU1 675 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 TRDV1A0A1B0GX56 115 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 OR2W5A6NFC9 320 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 C1QTNF3-AMACRE9PGA6 284 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 ZNF593O00488 134 aaPredicted RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 SOCS6O14544 535 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 VEGFDO43915 354 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 SUSD5O60279 629 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 CA3P07451 260 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 GIPP09681 153 aaPredicted RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 HIST1H1TP22492 207 aaPredicted RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 PTGFRP43088 359 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 MTNR1AP48039 350 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 SRP9P49458 86 aaKnown RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 PPM1FP49593 454 aaPredicted RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 RGS8P57771 180 aaPredicted RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 RAC1P63000 192 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 TFF2Q03403 129 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 SGCGQ13326 291 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 TPBGQ13641 420 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 UBXN2BQ14CS0 331 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 AGERQ15109 404 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 ZNF542PQ5EBM4 170 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 TEX30Q5JUR7 227 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 TMEM201Q5SNT2 666 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 MTFR2Q6P444 385 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 FAM111BQ6SJ93 734 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 LRRN1Q6UXK5 716 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 TMUB2Q71RG4 321 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 MARCH9Q86YJ5 346 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 SKA3Q8IX90 412 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 ETFBKMTQ8IXQ9 262 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 NEIL3Q8TAT5 605 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 EDARADDQ8WWZ3 215 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 PATE1Q8WXA2 126 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 GTF3AQ92664 365 aaKnown RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 CDS1Q92903 461 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 TSACCQ96A04 125 aaPredicted RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 TMEM41AQ96HV5 264 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 C7orf50Q9BRJ6 194 aaKnown RBP4.65□□□□□ -1.67
SSR1-202ENST00000397511 MENTQ9BUN1 341 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 ARL6Q9H0F7 186 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 ENKD1Q9H0I2 346 aa4.65□□□□□ -1.67
SSR1-202ENST00000397511 ISG20L2Q9H9L3 353 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms