RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 RPL4P36578 427 aaKnown RBP15.35■□□□□ 0.05
NUP50-202ENST00000396096 HTR3AP46098 478 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 CSNK1EP49674 416 aaKnown RBP15.35■□□□□ 0.05
NUP50-202ENST00000396096 CFHR1Q03591 330 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 PON3Q15166 354 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 TAB1Q15750 504 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 CARTPTQ16568 116 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 C17orf47Q8NEP4 570 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 NLGN4YQ8NFZ3 816 aaPredicted RBP15.35■□□□□ 0.05
NUP50-202ENST00000396096 OR1L3Q8NH93 324 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.35■□□□□ 0.05
NUP50-202ENST00000396096 ZMYND19Q96E35 227 aaPredicted RBP15.35■□□□□ 0.05
NUP50-202ENST00000396096 SLC41A2Q96JW4 573 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 C11orf54Q9H0W9 315 aaPredicted RBP15.35■□□□□ 0.05
NUP50-202ENST00000396096 PPIL3Q9H2H8 161 aaKnown RBP15.35■□□□□ 0.05
NUP50-202ENST00000396096 PRO3102Q9H379 93 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 WNT16Q9UBV4 365 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 ADAM18Q9Y3Q7 739 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 PLA2G10O15496 165 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 DUX1O43812 170 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 HPGDP15428 266 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 SHC1P29353 583 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 ARL4DP49703 201 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 TMED10P49755 219 aaKnown RBP15.34■□□□□ 0.05
NUP50-202ENST00000396096 SLC3A1Q07837 685 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 ZNF74Q16587 644 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 PAMR1Q6UXH9 720 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 APOOLQ6UXV4 268 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 SLC35F2Q8IXU6 374 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 RDH10Q8IZV5 341 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 LRRC75AQ8NAA5 344 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 PHOSPHO1Q8TCT1 267 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 TTYH2Q9BSA4 534 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 YIPF2Q9BWQ6 316 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 LAT2Q9GZY6 243 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 SLC6A5Q9Y345 797 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 CLCA3PQ9Y6N3 262 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 SPAG17Q6Q759 2223 aa15.34■□□□□ 0.05
NUP50-202ENST00000396096 IMPA2O14732 288 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 SERPINA3P01011 423 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 SLC2A2P11168 524 aaPredicted RBP15.33■□□□□ 0.05
NUP50-202ENST00000396096 SPI1P17947 270 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 ALAS2P22557 587 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 MYL9P24844 172 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 PYCR1P32322 319 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 THBS2P35442 1172 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 GRK6P43250 576 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 GPLD1P80108 840 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 YOD1Q5VVQ6 348 aaPredicted RBP15.33■□□□□ 0.05
NUP50-202ENST00000396096 PRSS42Q7Z5A4 293 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 CEACAM19Q7Z692 300 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 KMT5CQ86Y97 462 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 Q8N402 240 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 RFLNBQ8N5W9 214 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 GATSQ8NAP1 163 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 SMAP2Q8WU79 429 aaPredicted RBP15.33■□□□□ 0.05
NUP50-202ENST00000396096 FAM210AQ96ND0 272 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 OR8D2Q9GZM6 311 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 EML5Q05BV3 1969 aa15.33■□□□□ 0.05
NUP50-202ENST00000396096 A0A0G2JK05 382 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 OR6C68A6NDL8 312 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 TMEM221A6NGB7 291 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 A8MUA0 341 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 TO15178 435 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 PRKNO60260 465 aaPredicted RBP15.33■□□□□ 0.04
NUP50-202ENST00000396096 GLB1P16278 677 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 MST1P26927 711 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 SLC6A8P48029 635 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 GBX2P52951 348 aaPredicted RBP15.33■□□□□ 0.04
NUP50-202ENST00000396096 SLC25A1P53007 311 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 HSF2Q03933 536 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 CDK5R1Q15078 307 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 P2RY14Q15391 338 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 IDNKQ5T6J7 187 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 CBLN3Q6UW01 205 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 LRRC28Q86X40 367 aaPredicted RBP15.33■□□□□ 0.04
NUP50-202ENST00000396096 MOSPD2Q8NHP6 518 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 GHSRQ92847 366 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 SMIM19Q96E16 107 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 PELI1Q96FA3 418 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 MRPL48Q96GC5 212 aaKnown RBP15.33■□□□□ 0.04
NUP50-202ENST00000396096 ZC3HAV1LQ96H79 300 aaKnown RBP15.33■□□□□ 0.04
NUP50-202ENST00000396096 NMNAT3Q96T66 252 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 NUDT9Q9BW91 350 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 MFRPQ9BY79 579 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 DHCR7Q9UBM7 475 aaKnown RBP15.33■□□□□ 0.04
NUP50-202ENST00000396096 ADAMTS20P59510 1910 aa15.33■□□□□ 0.04
NUP50-202ENST00000396096 ABCA7Q8IZY2 2146 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 TRAV1-2A0A0B4J238 106 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 TXNDC12O95881 172 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 ASAH2BP0C7U1 165 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 TRAPPC2P0DI81 140 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 TRAPPC2BP0DI82 140 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 ELK1P19419 428 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 BCKDHBP21953 392 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 FBLP22087 321 aaKnown RBP15.32■□□□□ 0.04
NUP50-202ENST00000396096 CSF2RBP32927 897 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 EFNA3P52797 238 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 ERVK-25P63136 954 aa15.32■□□□□ 0.04
NUP50-202ENST00000396096 IL18Q14116 193 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms