RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 PRAMEF10O60809 474 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ENTPD6O75354 484 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 UBXN7O94888 489 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ZIC2O95409 532 aaPredicted RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 TGM6O95932 706 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 IGKV3-11P04433 115 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 DBIP07108 87 aaKnown RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 GP1BAP07359 652 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 FGF2P09038 288 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 OSMP13725 252 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ETFAP13804 333 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 CXCL3P19876 107 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ELAVL4P26378 380 aaKnown RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 CFPP27918 469 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 TLX1P31314 330 aaPredicted RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 FGF9P31371 208 aaPredicted RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 TRHRP34981 398 aaPredicted RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 ZNF81P51508 661 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ATP12AP54707 1039 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ARF3P61204 181 aaPredicted RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 MC1RQ01726 317 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 DHODHQ02127 395 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ZNF91Q05481 1191 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ZNF239Q16600 458 aaKnown RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 PLK5Q496M5 336 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 AKIRIN2Q53H80 203 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 PRRT3Q5FWE3 981 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 LIPKQ5VXJ0 399 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ZNF385CQ66K41 422 aaPredicted RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 PMS2CLQ68D20 193 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 CD200R1LQ6Q8B3 271 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 TMPRSS11FQ6ZWK6 438 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 FGD2Q7Z6J4 655 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 EIF4E3Q8N5X7 224 aaKnown RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 ZNF615Q8N8J6 731 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ZNF485Q8NCK3 441 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 FAM46DQ8NEK8 389 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 OR52P1PQ8NH57 321 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 SLC2A12Q8TD20 617 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 SKA2Q8WVK7 121 aaPredicted RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 RBM18Q96H35 190 aaKnown RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 TMEM19Q96HH6 336 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 SENP5Q96HI0 755 aaPredicted RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 VSTM2LQ96N03 204 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 SLC6A18Q96N87 628 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 OR2M2Q96R28 347 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 OR7D2Q96RA2 312 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 UBL7Q96S82 380 aaPredicted RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 DLL4Q9NR61 685 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 LANCL2Q9NS86 450 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 HPF1Q9NWY4 346 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 HAO2Q9NYQ3 351 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 SUSD2Q9UGT4 822 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ICAM5Q9UMF0 924 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ENTPD4Q9Y227 616 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 EXOGQ9Y2C4 368 aaKnown RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 KCNK7Q9Y2U2 307 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 SNX11Q9Y5W9 270 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 SESN1Q9Y6P5 492 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 TRAV6A0A075B6T7 132 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 VSTM2BA6NLU5 285 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 MPTX1A8MV57 137 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 F8W036 122 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 ADAM10O14672 748 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 IMPA2O14732 288 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 HPGDSO60760 199 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 IFNW1P05000 195 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 CHRM4P08173 479 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 ZNF888P0CJ79 500 aaPredicted RBP4.93□□□□□ -1.62
VPS41-203ENST00000395969 SULT1A3P0DMM9 295 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 SULT1A4P0DMN0 295 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 STAT5AP42229 794 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 SSR2P43308 183 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 ZNF136P52737 540 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 MANFP55145 182 aaKnown RBP4.93□□□□□ -1.62
VPS41-203ENST00000395969 IL18Q14116 193 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 LTB4RQ15722 352 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 SNAPC1Q16533 368 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 EXOC3L2Q2M3D2 409 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 SGO1Q5FBB7 561 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 BCL2L15Q5TBC7 163 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 PTCRAQ6ISU1 281 aaPredicted RBP4.93□□□□□ -1.62
VPS41-203ENST00000395969 CORO6Q6QEF8 472 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 CEACAM20Q6UY09 585 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 PTCHD4Q6ZW05 846 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 DND1Q8IYX4 353 aaKnown RBP4.93□□□□□ -1.62
VPS41-203ENST00000395969 ZNF619Q8N2I2 560 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 ARL14Q8N4G2 192 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 BMPERQ8N8U9 685 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 AMER3Q8N944 861 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 OR9Q1Q8NGQ5 310 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 NFKBIDQ8NI38 313 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 TM9SF4Q92544 642 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 ZDHHC12Q96GR4 267 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 TPD52L3Q96J77 140 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 HS6ST2Q96MM7 605 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 CDX2Q99626 313 aaPredicted RBP4.93□□□□□ -1.62
VPS41-203ENST00000395969 SIDT1Q9NXL6 827 aaKnown RBP4.93□□□□□ -1.62
VPS41-203ENST00000395969 SCP2D1Q9UJQ7 156 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 ZNF222Q9UK12 451 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms