RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 PCDHGB6Q9Y5F9 930 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 A0A087WUJ7 227 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 TEX13CA0A0J9YWL9 993 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 A0A1W2PQM1 296 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 FITM1A5D6W6 292 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 TMCC2O75069 709 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 CLPSP04118 112 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 CXCR1P25024 350 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 KDM8Q8N371 416 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 ZNF511Q8NB15 262 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 SNX33Q8WV41 574 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 KTI12Q96EK9 354 aaPredicted RBP10.18□□□□□ -0.78
TCOF1-203ENST00000394269 PALMDQ9NP74 551 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 MED17Q9NVC6 651 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 BABAM2Q9NXR7 383 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 MPDZO75970 2070 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 SLC22A31A6NKX4 558 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 EFCAB7A8K855 629 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 IDSB3KWA1 339 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 NPIPB9F8W1W9 429 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 CBFA2T3O75081 653 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 UPK1BO75841 260 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 RPP14O95059 124 aaKnown RBP10.18□□□□□ -0.78
TCOF1-203ENST00000394269 PSMB10P40306 273 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 CTXN1P60606 82 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 E2F1Q01094 437 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 PON3Q15166 354 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 LEG1Q6P5S2 330 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 SSX6Q7RTT6 188 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 SYT9Q86SS6 491 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 LSMEM1Q8N8F7 131 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 OR13C5Q8NGS8 318 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 ZNRF4Q8WWF5 429 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 EDAQ92838 391 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 OMA1Q96E52 524 aa10.18□□□□□ -0.78
TCOF1-203ENST00000394269 PELOQ9BRX2 385 aaKnown RBP10.18□□□□□ -0.78
TCOF1-203ENST00000394269 CCDC59Q9P031 241 aaKnown RBP10.18□□□□□ -0.78
TCOF1-203ENST00000394269 GABRPO00591 440 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 CPNE3O75131 537 aaKnown RBP10.17□□□□□ -0.78
TCOF1-203ENST00000394269 HLA-DPB1P04440 258 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 HIST1H2ABP04908 130 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 SBK2P0C263 348 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 MSL3P1P0C860 447 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 ODF4Q2M2E3 257 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 WBP2NLQ6ICG8 309 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 C19orf48Q6RUI8 117 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 HIST3H2AQ7L7L0 130 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 GRAMD2AQ8IUY3 354 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 LYSMD2Q8IV50 215 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 OR5W2Q8NH69 310 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 METTL21AQ8WXB1 218 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 HIST1H2ACQ93077 130 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 SLC41A2Q96JW4 573 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 ZNF578Q96N58 590 aaPredicted RBP10.17□□□□□ -0.78
TCOF1-203ENST00000394269 OR1F2PQ96R84 312 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 GNG8Q9UK08 70 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 MRTO4Q9UKD2 239 aaKnown RBP10.17□□□□□ -0.78
TCOF1-203ENST00000394269 MMACHCQ9Y4U1 282 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 BLACEA4D250 179 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 FABP12A6NFH5 140 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 SLC25A12O75746 678 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 ABCD3P28288 659 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 EPHA8P29322 1005 aaPredicted RBP10.17□□□□□ -0.78
TCOF1-203ENST00000394269 BCAP31P51572 246 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 ZNF117Q03924 483 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 TPBGQ13641 420 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 EBPQ15125 230 aaKnown RBP10.17□□□□□ -0.78
TCOF1-203ENST00000394269 TMEM44Q2T9K0 475 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 NKAIN1Q4KMZ8 207 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 IDNKQ5T6J7 187 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 RPL13AP3Q6NVV1 102 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 TMEM71Q6P5X7 295 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 SPATC1Q76KD6 591 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 OR7G1Q8NGA0 311 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 CEP76Q8TAP6 659 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 RARRES3Q9UL19 164 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 PIEZO2Q9H5I5 2752 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 TVP23AA6NH52 213 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 SELENOFO60613 162 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 IL33O95760 270 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 GABRA5P31644 462 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 CTBP2P56545 445 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 OXA1LQ15070 435 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 NR0B2Q15466 257 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 PYDC2Q56P42 97 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 BICRALQ6AI39 1079 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 ARHGAP11AQ6P4F7 1023 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 IL20RBQ6UXL0 311 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 ZNF554Q86TJ5 538 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 JAZF1Q86VZ6 243 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 ZSCAN1Q8NBB4 408 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 PMM1Q92871 262 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 ORAI1Q96D31 301 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 WWTR1Q9GZV5 400 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 SLC22A11Q9NSA0 550 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 VDAC3Q9Y277 283 aa10.17□□□□□ -0.78
TCOF1-203ENST00000394269 TCRBV16S1A1N1A0A5B0 115 aa10.16□□□□□ -0.78
TCOF1-203ENST00000394269 OR6C68A6NDL8 312 aa10.16□□□□□ -0.78
TCOF1-203ENST00000394269 TFECO14948 347 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-203ENST00000394269 SSX4O60224 188 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms