RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 ZNF680Q8NEM1 530 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 ADAMTS14Q8WXS8 1223 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 TRPV4Q9HBA0 871 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 RPS6KB2Q9UBS0 482 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 CHRNA9Q9UGM1 479 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 ZNF346Q9UL40 294 aaKnown RBP12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 BAIAP2Q9UQB8 552 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 OR2W5A6NFC9 320 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 ZSCAN5BA6NJL1 495 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 GPR171O14626 319 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 TNFSF14O43557 240 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 GMDSO60547 372 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 SLC22A5O76082 557 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 NDUFB2O95178 105 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 PTHLHP12272 177 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 ZNF81P51508 661 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 PSG6Q00889 435 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 POU4F2Q12837 409 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 POU4F3Q15319 338 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 TEX261Q6UWH6 196 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 CSNK1A1LQ8N752 337 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 TEX19Q8NA77 164 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 SUN5Q8TC36 379 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 SLC2A12Q8TD20 617 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 HAVCR2Q8TDQ0 301 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 HMGB4Q8WW32 186 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 ANKRD9Q96BM1 317 aaPredicted RBP12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 BMFQ96LC9 184 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 HSPA12BQ96MM6 686 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 MYADMQ96S97 322 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 CAMK2AQ9UQM7 478 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 RCE1Q9Y256 329 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 DTX4Q9Y2E6 619 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 U3KQ87 197 aa12.81□□□□□ -0.36
GAPVD1-205ENST00000394084 TP53BP1Q12888 1972 aaPredicted RBP12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 DOCK8Q8NF50 2099 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 PRKNO60260 465 aaPredicted RBP12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 NKX2-2O95096 273 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 OR2T7P0C7T2 308 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 HOXB2P14652 356 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 MAP3K8P41279 467 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 PON3Q15166 354 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 HACD4Q5VWC8 232 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 SDE2Q6IQ49 451 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 OR9A4Q8NGU2 314 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 OR2T27Q8NH04 317 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 RPLP0P6Q8NHW5 317 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 RASD2Q96D21 266 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 B3GNT2Q9NY97 397 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 NCDNQ9UBB6 729 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 EIF3KQ9UBQ5 218 aaKnown RBP12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 GALR3O60755 368 aaPredicted RBP12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 AK1P00568 194 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 UCHL1P09936 223 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 DNASE1P24855 282 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 NTSR1P30989 418 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 ERVK-25P63136 954 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 KLF9Q13886 244 aaPredicted RBP12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 ESCO2Q56NI9 601 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 ZNF542PQ5EBM4 170 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 TMEM255AQ5JRV8 349 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 ZNF782Q6ZMW2 699 aaPredicted RBP12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 CCDC28AQ8IWP9 274 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 ZNF527Q8NB42 609 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 CCDC3Q9BQI4 270 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 TRIM2Q9C040 744 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 NRIP3Q9NQ35 241 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 HRASLS2Q9NWW9 162 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 ELF5Q9UKW6 265 aaPredicted RBP12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 SPATA2Q9UM82 520 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 GON4LQ3T8J9 2241 aa12.8□□□□□ -0.36
GAPVD1-205ENST00000394084 ANKRD61A6NGH8 418 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 PIN1P1O15428 100 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 RAF1P04049 648 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 ACTA2P62736 377 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 ACTG2P63267 376 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 ZCCHC12Q6PEW1 402 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 BTN2A1Q7KYR7 527 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 SGTBQ96EQ0 304 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 SIPA1Q96FS4 1042 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 SPACA7Q96KW9 195 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 CHIAQ9BZP6 476 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 C20orf85Q9H1P6 137 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 OR10A4Q9H209 315 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 ENTPD2Q9Y5L3 495 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 TRANK1O15050 2925 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 H3BSH0 61 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 RPP14O95059 124 aaKnown RBP12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 KLF8O95600 359 aaPredicted RBP12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 KIAA1024LP59773 190 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 CTHRC1Q96CG8 243 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 MAP6Q96JE9 813 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 ZNF426Q9BUY5 554 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 C2orf42Q9NWW7 574 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 SERTAD3Q9UJW9 196 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 FBXL21Q9UKT6 434 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 PCDHGA9Q9Y5G4 932 aaKnown RBP12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 SZT2Q5T011 3432 aa12.79□□□□□ -0.36
GAPVD1-205ENST00000394084 FANCMQ8IYD8 2048 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms