RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 SCMH1Q96GD3 660 aa17.51■□□□□ 0.39
CCDC50-202ENST00000392456 SERINC2Q96SA4 455 aa17.51■□□□□ 0.39
CCDC50-202ENST00000392456 VNN3Q9NY84 501 aa17.51■□□□□ 0.39
CCDC50-202ENST00000392456 FBXO4Q9UKT5 387 aa17.51■□□□□ 0.39
CCDC50-202ENST00000392456 U3KQA8 63 aa17.51■□□□□ 0.39
CCDC50-202ENST00000392456 NME6O75414 186 aaPredicted RBP17.5■□□□□ 0.39
CCDC50-202ENST00000392456 ATXN8OSP0DMR3 200 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 APEX1P27695 318 aaKnown RBP17.5■□□□□ 0.39
CCDC50-202ENST00000392456 CD1CP29017 333 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 CHI3L1P36222 383 aaPredicted RBP17.5■□□□□ 0.39
CCDC50-202ENST00000392456 NCBP2P52298 156 aaKnown RBP eCLIP17.5■□□□□ 0.39
CCDC50-202ENST00000392456 SSX1Q16384 188 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 CPZQ66K79 652 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 CYB5R2Q6BCY4 276 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 ABHD13Q7L211 337 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 WDSUB1Q8N9V3 476 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 OR9A4Q8NGU2 314 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 TCTN2Q96GX1 697 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 KCNJ15Q99712 375 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 TCEAL7Q9BRU2 100 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 CHMP1AQ9HD42 196 aaPredicted RBP17.5■□□□□ 0.39
CCDC50-202ENST00000392456 SOHLH2Q9NX45 425 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 GHRLQ9UBU3 117 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 A0A1B0GVI7 797 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 POM121CA8CG34 1229 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 CLCA1A8K7I4 914 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 PRSS47A8MTI9 375 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 SERPINA1P01009 418 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 SP9P0CG40 484 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 POU3F2P20265 443 aaPredicted RBP17.5■□□□□ 0.39
CCDC50-202ENST00000392456 AQP1P29972 269 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 CRYBA2P53672 197 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 SNRPEP62304 92 aaKnown RBP17.5■□□□□ 0.39
CCDC50-202ENST00000392456 PPA1Q15181 289 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 RNF212Q495C1 297 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 PEAR1Q5VY43 1037 aaPredicted RBP17.5■□□□□ 0.39
CCDC50-202ENST00000392456 SLC44A2Q8IWA5 706 aaPredicted RBP17.5■□□□□ 0.39
CCDC50-202ENST00000392456 ZNF454Q8N9F8 522 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 ZNF764Q96H86 408 aaPredicted RBP17.5■□□□□ 0.39
CCDC50-202ENST00000392456 PEX11GQ96HA9 241 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 ZNF681Q96N22 645 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 CAPN10Q9HC96 672 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 TREM2Q9NZC2 230 aa17.5■□□□□ 0.39
CCDC50-202ENST00000392456 TLCD2A6NGC4 264 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 URADA6NGE7 173 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 B3GALT2O43825 422 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 GALR3O60755 368 aaPredicted RBP17.49■□□□□ 0.39
CCDC50-202ENST00000392456 GCM2O75603 506 aaPredicted RBP17.49■□□□□ 0.39
CCDC50-202ENST00000392456 SOX30O94993 753 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 STSP08842 583 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 ID2Q02363 134 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 MADCAM1Q13477 382 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 PRTGQ2VWP7 1150 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 GUSBP11Q6P575 273 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 HAGHLQ6PII5 290 aaPredicted RBP17.49■□□□□ 0.39
CCDC50-202ENST00000392456 POMZP3Q6PJE2 187 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 Q8N402 240 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 COQ8AQ8NI60 647 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 DOK4Q8TEW6 326 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 CCDC74AQ96AQ1 378 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 NUDT22Q9BRQ3 303 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 TAPBPLQ9BX59 468 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 DLL4Q9NR61 685 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 NLGN3Q9NZ94 848 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 ZNF451Q9Y4E5 1061 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 UBE2CO00762 179 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 GP1BAP07359 652 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 NR2F6P10588 404 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 EDN3P14138 238 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 UQCRC2P22695 453 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 NR0B1P51843 470 aaKnown RBP17.49■□□□□ 0.39
CCDC50-202ENST00000392456 EPHA4P54764 986 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 ILKQ13418 452 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 EXOC3L2Q2M3D2 409 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 TRIM61Q5EBN2 209 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 FTMTQ8N4E7 242 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 OR52N2Q8NGI0 321 aa17.49■□□□□ 0.39
CCDC50-202ENST00000392456 SPRTNQ9H040 489 aaPredicted RBP17.49■□□□□ 0.39
CCDC50-202ENST00000392456 ACSS1Q9NUB1 689 aaPredicted RBP17.49■□□□□ 0.39
CCDC50-202ENST00000392456 A0A0A6YYC8 382 aaPredicted RBP17.48■□□□□ 0.39
CCDC50-202ENST00000392456 CPED1A4D0V7 1026 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 MYO1GB0I1T2 1018 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 E9PQ18 207 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 G3V3Q6 166 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 I3L1I5 382 aaPredicted RBP17.48■□□□□ 0.39
CCDC50-202ENST00000392456 RDH16O75452 317 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 TNFRSF17Q02223 184 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 ECH1Q13011 328 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 BCL2L15Q5TBC7 163 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 TNFAIP8L2Q6P589 184 aaPredicted RBP17.48■□□□□ 0.39
CCDC50-202ENST00000392456 ZFP82Q8N141 532 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 OTUB1Q96FW1 271 aaPredicted RBP17.48■□□□□ 0.39
CCDC50-202ENST00000392456 C14orf144Q96I85 54 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 LURAP1Q96LR2 239 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 SPSB2Q99619 263 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 TMEM43Q9BTV4 400 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 RAB33BQ9H082 229 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 PPP1R3EQ9H7J1 279 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 EXOSC4Q9NPD3 245 aaKnown RBP17.48■□□□□ 0.39
CCDC50-202ENST00000392456 B3GAT2Q9NPZ5 323 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms