RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 RNF175Q8N4F7 328 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 SLC35G3Q8N808 338 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 FAM174AQ8TBP5 190 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 ARNT2Q9HBZ2 717 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 ANHXE9PGG2 379 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 THBS1P07996 1170 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 FOLR3P41439 243 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 CLDN8P56748 225 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 CXADRP78310 365 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 COL13A1Q5TAT6 717 aaPredicted RBP13.82□□□□□ -0.2
CCDC50-201ENST00000392455 ZNF620Q6ZNG0 422 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 SPATA6Q9NWH7 488 aaPredicted RBP13.82□□□□□ -0.2
CCDC50-201ENST00000392455 AKAP12Q02952 1782 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 NEURL4Q96JN8 1562 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 DCAF7P61962 342 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 TMEM236Q5W0B7 351 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 ZNF836Q6ZNA1 936 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 REC114Q7Z4M0 266 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 IL1F10Q8WWZ1 152 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 KIRREL1Q96J84 757 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 EGLN1Q9GZT9 426 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 FAM208AQ9UK61 1670 aaKnown RBP13.82□□□□□ -0.2
CCDC50-201ENST00000392455 CTXN2P0C2S0 81 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 FKBP2P26885 142 aaKnown RBP13.82□□□□□ -0.2
CCDC50-201ENST00000392455 NFATC4Q14934 902 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 PCLAFQ15004 111 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 SLC35D2Q76EJ3 337 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 MISPQ8IVT2 679 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 CDRT4Q8N9R6 151 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 WDR4P57081 412 aaKnown RBP13.82□□□□□ -0.2
CCDC50-201ENST00000392455 GALNT2Q10471 571 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 LCN8Q6JVE9 175 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 ADAM5Q6NVV9 412 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 ZNF454Q8N9F8 522 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 FAM213BQ8TBF2 198 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 MED30Q96HR3 178 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 C12orf42Q96LP6 360 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 METTL9Q9H1A3 318 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 ZNF395Q9H8N7 513 aaPredicted RBP13.82□□□□□ -0.2
CCDC50-201ENST00000392455 SEMA4GQ9NTN9 838 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 Q9Y3F1 56 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 MEOX1P50221 254 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 NFATC3Q12968 1075 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 GLYR1Q49A26 553 aaPredicted RBP13.81□□□□□ -0.2
CCDC50-201ENST00000392455 LRRC56Q8IYG6 542 aaPredicted RBP13.81□□□□□ -0.2
CCDC50-201ENST00000392455 CPNE4Q96A23 557 aaPredicted RBP13.81□□□□□ -0.2
CCDC50-201ENST00000392455 ENTPD2Q9Y5L3 495 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 HEMK1Q9Y5R4 338 aaPredicted RBP13.81□□□□□ -0.2
CCDC50-201ENST00000392455 GLCEO94923 617 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 SLC35A2P78381 396 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 P2RY14Q15391 338 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 PXDC1Q5TGL8 231 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 OR6C2Q9NZP2 312 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 CBY3A6NI87 242 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 COCHO43405 550 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 ACRV1P26436 265 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 RFX2P48378 723 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 BMXP51813 675 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 RRADP55042 308 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 C6orf136Q5SQH8 315 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 CCDC74AQ96AQ1 378 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 MSLNLQ96KJ4 702 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 OR5B2Q96R09 309 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 NOX3Q9HBY0 568 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 DECR2Q9NUI1 292 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 POLHQ9Y253 713 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 ZNF142P52746 1687 aaPredicted RBP13.81□□□□□ -0.2
CCDC50-201ENST00000392455 CICQ96RK0 1608 aaPredicted RBP13.81□□□□□ -0.2
CCDC50-201ENST00000392455 KDM4FA0A1W2PPD8 638 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 DUSP23Q9BVJ7 150 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 TPPP3Q9BW30 176 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 BABAM2Q9NXR7 383 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 FEZF1A0PJY2 475 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 OR2C1O95371 312 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 CLDN1O95832 211 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 CBX7O95931 251 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 HSF1Q00613 529 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 GPR19Q15760 415 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 RTL8BQ17RB0 113 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 MSS51Q4VC12 460 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 SFRP4Q6FHJ7 346 aaPredicted RBP13.81□□□□□ -0.2
CCDC50-201ENST00000392455 NDUFAF7Q7L592 441 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 CCDC74BQ96LY2 380 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 SERINC2Q96SA4 455 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 A0A1W2PP55 124 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 TERTO14746 1132 aaKnown RBP13.81□□□□□ -0.2
CCDC50-201ENST00000392455 SOD2P04179 222 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 DRD5P21918 477 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 USF1P22415 310 aaPredicted RBP13.81□□□□□ -0.2
CCDC50-201ENST00000392455 SLC36A2Q495M3 483 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 TMEM107Q6UX40 140 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 CDH26Q8IXH8 852 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 PXT1Q8NFP0 134 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 SLC35E1Q96K37 410 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 NECTIN4Q96NY8 510 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 ZPBPQ9BS86 351 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 SHARPINQ9H0F6 387 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 OBP2BQ9NPH6 170 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 MED17Q9NVC6 651 aa13.81□□□□□ -0.2
CCDC50-201ENST00000392455 F5H5K5 113 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms