RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 RNF17Q9BXT8 1623 aaKnown RBP2.28□□□□□ -2.04
PTPRC-205ENST00000391970 KDM5CP41229 1560 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 DIP2AQ14689 1571 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 MAGI3Q5TCQ9 1506 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 AQRO60306 1485 aaKnown RBP eCLIP2.28□□□□□ -2.04
PTPRC-205ENST00000391970 MYOM2P54296 1465 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 IQSEC2Q5JU85 1478 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 SBNO1A3KN83 1393 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 UBN2Q6ZU65 1347 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 SYNJ2BP-COX16A0A087WUM0 186 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 SMIM28A0A1B0GU29 152 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 LINC00854A0A1B0GVQ3 168 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 LRRIQ3A6PVS8 624 aaPredicted RBP2.28□□□□□ -2.04
PTPRC-205ENST00000391970 WWP2O00308 870 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 PRRG1O14668 218 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 KMOO15229 486 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 MTX2O75431 263 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 UGT2B17O75795 530 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 SERF1AO75920 110 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 LRATO95237 230 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 IGHV3-23P01764 117 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 P0C879 139 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 IGLL1P15814 213 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 SYT1P21579 422 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 VDAC1P21796 283 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 LAP3P28838 519 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 UGT1A3P35503 534 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 HSD17B2P37059 387 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 KIR2DS2P43631 304 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 P2RY1P47900 373 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 IGLV3-21P80748 117 aaPredicted RBP2.28□□□□□ -2.04
PTPRC-205ENST00000391970 IFFO1Q0D2I5 559 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 IL24Q13007 206 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 CHIT1Q13231 466 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 CUL1Q13616 776 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 MESDQ14696 234 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 CAVIN4Q5BKX8 364 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 SPATA46Q5T0L3 261 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 ZNF658Q5TYW1 1059 aaPredicted RBP2.28□□□□□ -2.04
PTPRC-205ENST00000391970 TMEM225Q6GV28 225 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 KCNIP4Q6PIL6 250 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 USP50Q70EL3 339 aaPredicted RBP2.28□□□□□ -2.04
PTPRC-205ENST00000391970 FRA10AC1Q70Z53 315 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 MOB1BQ7L9L4 216 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 SLC51BQ86UW2 128 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 TPRA1Q86W33 373 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 FBXO16Q8IX29 292 aaPredicted RBP2.28□□□□□ -2.04
PTPRC-205ENST00000391970 SKA3Q8IX90 412 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 UBQLNLQ8IYU4 475 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 ZBED8Q8IZ13 594 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 SLC38A6Q8IZM9 456 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 KIR3DL3Q8N743 410 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 OR4D5Q8NGN0 318 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 OR1F12Q8NHA8 337 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 FBXO30Q8TB52 745 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.28□□□□□ -2.04
PTPRC-205ENST00000391970 PEX13Q92968 403 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 OPTNQ96CV9 577 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 SLC25A38Q96DW6 304 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 TMA16Q96EY4 203 aaKnown RBP2.28□□□□□ -2.04
PTPRC-205ENST00000391970 CEP19Q96LK0 163 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 RBM14Q96PK6 669 aaKnown RBP2.28□□□□□ -2.04
PTPRC-205ENST00000391970 PSKH2Q96QS6 385 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 BPIFA3Q9BQP9 254 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 CHIAQ9BZP6 476 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 NT5C3AQ9H0P0 336 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 RHBGQ9H310 441 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 Q9H3A6 140 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 ZNF385DQ9H6B1 395 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 HAUS4Q9H6D7 363 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 C8orf33Q9H7E9 229 aaPredicted RBP2.28□□□□□ -2.04
PTPRC-205ENST00000391970 VCPKMTQ9H867 229 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 ZNF702PQ9H963 129 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 UCK1Q9HA47 277 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 RAB18Q9NP72 206 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 DMAP1Q9NPF5 467 aaPredicted RBP2.28□□□□□ -2.04
PTPRC-205ENST00000391970 SLC17A5Q9NRA2 495 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 UFSP2Q9NUQ7 469 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 PRR34Q9NV39 138 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 TAS2R7Q9NYW3 318 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 EXTL2Q9UBQ6 330 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 CLEC4EQ9ULY5 219 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 CFL2Q9Y281 166 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 AK6Q9Y3D8 172 aaKnown RBP2.28□□□□□ -2.04
PTPRC-205ENST00000391970 FADS3Q9Y5Q0 445 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 KDM5AP29375 1690 aaKnown RBP2.28□□□□□ -2.05
PTPRC-205ENST00000391970 TOP2BQ02880 1626 aa2.28□□□□□ -2.05
PTPRC-205ENST00000391970 ATP7AQ04656 1500 aa2.27□□□□□ -2.05
PTPRC-205ENST00000391970 FANCAO15360 1455 aa2.27□□□□□ -2.05
PTPRC-205ENST00000391970 CCDC141Q6ZP82 1450 aa2.27□□□□□ -2.05
PTPRC-205ENST00000391970 MAGI2Q86UL8 1455 aa2.27□□□□□ -2.05
PTPRC-205ENST00000391970 KDM6AO15550 1401 aaPredicted RBP2.27□□□□□ -2.05
PTPRC-205ENST00000391970 NAIPQ13075 1403 aa2.27□□□□□ -2.05
PTPRC-205ENST00000391970 PTCH1Q13635 1447 aa2.27□□□□□ -2.05
PTPRC-205ENST00000391970 FAM135BQ49AJ0 1406 aa2.27□□□□□ -2.05
PTPRC-205ENST00000391970 KIAA0232Q92628 1395 aa2.27□□□□□ -2.05
PTPRC-205ENST00000391970 IGLV3-10A0A075B6K4 115 aa2.27□□□□□ -2.05
PTPRC-205ENST00000391970 IGHV1OR15-1A0A075B7D0 117 aa2.27□□□□□ -2.05
PTPRC-205ENST00000391970 C15orf38-AP3S2A0A0A6YYH1 394 aa2.27□□□□□ -2.05
PTPRC-205ENST00000391970 LOC105371267A0A1B0GV96 52 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms