RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 ELOA3BQ3SY89 546 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 FAM91A1Q658Y4 838 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 NANOGP8Q6NSW7 305 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 ERICH5Q6P6B1 374 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 SSX8Q7RTT4 187 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 RANBP3LQ86VV4 465 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-203ENST00000391855 CDC20BQ86Y33 519 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 GABRG1Q8N1C3 465 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 ELOA3Q8NG57 546 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 OR52E4Q8NGH9 312 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 OR10A6Q8NH74 314 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 RP9Q8TA86 221 aaKnown RBP11.26□□□□□ -0.61
GGPS1-203ENST00000391855 NINJ1Q92982 152 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 WFIKKN1Q96NZ8 548 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 ECSITQ9BQ95 431 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 SF3B5Q9BWJ5 86 aaKnown RBP11.26□□□□□ -0.61
GGPS1-203ENST00000391855 NANOGQ9H9S0 305 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 SELENONQ9NZV5 590 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 SLC9A8Q9Y2E8 581 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 NOSIPQ9Y314 301 aaKnown RBP11.26□□□□□ -0.61
GGPS1-203ENST00000391855 ZC3H12DA2A288 527 aaKnown RBP11.25□□□□□ -0.61
GGPS1-203ENST00000391855 LIPT2A6NK58 231 aa11.25□□□□□ -0.61
GGPS1-203ENST00000391855 FRS3O43559 492 aa11.25□□□□□ -0.61
GGPS1-203ENST00000391855 FMO6PO60774 539 aa11.25□□□□□ -0.61
GGPS1-203ENST00000391855 NPIPB7O75200 414 aa11.25□□□□□ -0.61
GGPS1-203ENST00000391855 GCM2O75603 506 aaPredicted RBP11.25□□□□□ -0.61
GGPS1-203ENST00000391855 VAMP5O95183 116 aa11.25□□□□□ -0.61
GGPS1-203ENST00000391855 FPR1P21462 350 aa11.25□□□□□ -0.61
GGPS1-203ENST00000391855 SF3A3Q12874 501 aaKnown RBP eCLIP11.25□□□□□ -0.61
GGPS1-203ENST00000391855 VEZF1Q14119 521 aa11.25□□□□□ -0.61
GGPS1-203ENST00000391855 SWT1Q5T5J6 900 aaKnown RBP11.25□□□□□ -0.61
GGPS1-203ENST00000391855 C1orf140Q5VVS0 124 aa11.25□□□□□ -0.61
GGPS1-203ENST00000391855 ULK3Q6PHR2 472 aa11.25□□□□□ -0.61
GGPS1-203ENST00000391855 Q6ZT83 130 aa11.25□□□□□ -0.61
GGPS1-203ENST00000391855 SPATA21Q7Z572 469 aa11.25□□□□□ -0.61
GGPS1-203ENST00000391855 ZNF100Q8IYN0 542 aa11.25□□□□□ -0.61
GGPS1-203ENST00000391855 SLC26A7Q8TE54 656 aa11.25□□□□□ -0.61
GGPS1-203ENST00000391855 SLC47A1Q96FL8 570 aa11.25□□□□□ -0.61
GGPS1-203ENST00000391855 ZNF300Q96RE9 604 aaPredicted RBP11.25□□□□□ -0.61
GGPS1-203ENST00000391855 TMEM27Q9HBJ8 222 aa11.25□□□□□ -0.61
GGPS1-203ENST00000391855 PARPBPQ9NWS1 579 aa11.25□□□□□ -0.61
GGPS1-203ENST00000391855 ABCA12Q86UK0 2595 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 APCP25054 2843 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 FBN2P35556 2912 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 LOC100653049A0A140TA62 436 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 A0A1B0GWA3 101 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 AQP7P3A6NL99 342 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 OR2T1O43869 369 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 TPST1O60507 370 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 KRT34O76011 436 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 IL32P24001 234 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 GTF2E2P29084 291 aaKnown RBP11.24□□□□□ -0.61
GGPS1-203ENST00000391855 DMTNQ08495 405 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 ITGADQ13349 1161 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 CEACAM7Q14002 265 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 OR7A5Q15622 319 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 BEX5Q5H9J7 111 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 ALG10BQ5I7T1 473 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 OTUD3Q5T2D3 398 aaPredicted RBP11.24□□□□□ -0.61
GGPS1-203ENST00000391855 SFRP5Q5T4F7 317 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 CCDC80Q76M96 950 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 CALHM3Q86XJ0 350 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 MFSD8Q8NHS3 518 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 SLC38A4Q969I6 547 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 TMEM45BQ96B21 275 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 APH1AQ96BI3 265 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 ARHGDIGQ99819 225 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 ACTR6Q9GZN1 396 aa11.24□□□□□ -0.61
GGPS1-203ENST00000391855 A0A0B4J2E0 115 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 A0A1B0GX12 115 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 DEFB108AA8MXU0 73 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 FAM220BPB1ANY3 271 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 M0QX08 132 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 NDUFAB1O14561 156 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 FZD7O75084 574 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 MRPL33O75394 65 aaKnown RBP11.23□□□□□ -0.61
GGPS1-203ENST00000391855 LGI1O95970 557 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 IFNA14P01570 189 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 KLK2P20151 261 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 COX5AP20674 150 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 HTR2AP28223 471 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 DNAJA1P31689 397 aaKnown RBP11.23□□□□□ -0.61
GGPS1-203ENST00000391855 GZMMP51124 257 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 NR1H2P55055 460 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 HOXC5Q00444 222 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 MFSD13AQ14CX5 517 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 NRF1Q16656 503 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 GLIPR1L2Q4G1C9 344 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 RABL3Q5HYI8 236 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 ZNF613Q6PF04 617 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 PAMR1Q6UXH9 720 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 CXorf67Q86X51 503 aaPredicted RBP11.23□□□□□ -0.61
GGPS1-203ENST00000391855 SMYD1Q8NB12 490 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 OR6S1Q8NH40 331 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 KISS1RQ969F8 398 aaPredicted RBP11.23□□□□□ -0.61
GGPS1-203ENST00000391855 EPYCQ99645 322 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 NGBQ9NPG2 151 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 ARMCX1Q9P291 453 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 ST6GALNAC2Q9UJ37 374 aa11.23□□□□□ -0.61
GGPS1-203ENST00000391855 RASD1Q9Y272 281 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms