RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 ARID2Q68CP9 1835 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 CACNA1GO43497 2377 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 TFPTP0C1Z6 253 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 CLUP10909 449 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 TGFBR3Q03167 851 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 NFATC3Q12968 1075 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 PGBD2Q6P3X8 592 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 BPHLQ86WA6 291 aaPredicted RBP12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 DEFB124Q8NES8 71 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 PFN4Q8NHR9 129 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 C15orf40Q8WUR7 153 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 HOXB13Q92826 284 aaPredicted RBP12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 TCEAL3Q969E4 200 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 CHIAQ9BZP6 476 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 SCN3AQ9NY46 2000 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 AGAP5A6NIR3 686 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 A8MVM7 634 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 STK17BO94768 372 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 VAMP1P23763 118 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 MAGEA2P43356 314 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 ANKRD34AQ69YU3 496 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 TCTN3Q6NUS6 607 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 AAED1Q7RTV5 226 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 CMIPQ8IY22 773 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 BOLLQ8N9W6 283 aaKnown RBP12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 LRRC46Q96FV0 321 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 Q96M85 177 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 UBQLN3Q9H347 655 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 PCDHB16Q9NRJ7 776 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 C14orf119Q9NWQ9 140 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 MYEF2Q9P2K5 600 aaKnown RBP12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 KIF13BQ9NQT8 1826 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 A0A087WV62 115 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 RRP8O43159 456 aaKnown RBP12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 WBP4O75554 376 aaKnown RBP12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 YRDCQ86U90 279 aaKnown RBP12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 ZSCAN4Q8NAM6 433 aaPredicted RBP12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 TMEM178AQ8NBL3 297 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 OR4N2Q8NGD1 307 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 SPTSSAQ969W0 71 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 HRASLS5Q96KN8 279 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 LMF1Q96S06 567 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 SMURF1Q9HCE7 757 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 SLC6A5Q9Y345 797 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 PCDHGB6Q9Y5F9 930 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 KCNE3Q9Y6H6 103 aa12.08□□□□□ -0.48
PTPRN2-202ENST00000389416 TMEM72A0PK05 275 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 ICOSLGO75144 302 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 GATBO75879 557 aaKnown RBP12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 BIDP55957 195 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 SLC26A5P58743 744 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 ABCA11PQ4W5N1 156 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 TMEM69Q5SWH9 247 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 LANCL3Q6ZV70 420 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 SLC22A16Q86VW1 577 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 DHRS1Q96LJ7 313 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 CNOT2Q9NZN8 540 aaKnown RBP12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 POLHQ9Y253 713 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 AK6Q9Y3D8 172 aaKnown RBP12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 FTCDNL1E5RQL4 147 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 KLRC4-KLRK1H3BQV0 150 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 BCAS1O75363 584 aaPredicted RBP12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 FASLGP48023 281 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 BCAP31P51572 246 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 ARPC4P59998 168 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 FOXK2Q01167 660 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 SCRN3Q0VDG4 424 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 DNASE1L3Q13609 305 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 ZFP69Q49AA0 526 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 HES5Q5TA89 166 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 C1orf140Q5VVS0 124 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 NIPAL3Q6P499 406 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 ZNF611Q8N823 705 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 ZNF511Q8NB15 262 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 MORN4Q8NDC4 146 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 IER2Q9BTL4 223 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 ALG12Q9BV10 488 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 PTPRFP10586 1907 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 RFPL3O75679 317 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 ZNF432O94892 652 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 SOD1P00441 154 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 ERCC1P07992 297 aaPredicted RBP12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 THBS1P07996 1170 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 CD14P08571 375 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 OR8G3PP0DMU2 310 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 TMEM225BP0DP42 221 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 EIF1P41567 113 aaKnown RBP12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 CMPK2Q5EBM0 449 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 FAM69AQ5T7M9 428 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 FCRL6Q6DN72 434 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 DPY19L4Q7Z388 723 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 GRINAQ7Z429 371 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 LRRC18Q8N456 261 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 GPR148Q8TDV2 347 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 NANOS1Q8WY41 292 aaKnown RBP12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 ZNF566Q969W8 418 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 FUZQ9BT04 418 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 FN3KQ9H479 309 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 TAS2R16Q9NYV7 291 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 VSX1Q9NZR4 365 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms