RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 KIAA1024LP59773 190 aa14.96□□□□□ -0.02
NKX3-1-201ENST00000380871 WDR45BQ5MNZ6 344 aa14.96□□□□□ -0.02
NKX3-1-201ENST00000380871 SERPINA12Q8IW75 414 aa14.96□□□□□ -0.02
NKX3-1-201ENST00000380871 ZNF527Q8NB42 609 aa14.96□□□□□ -0.02
NKX3-1-201ENST00000380871 OR4K13Q8NH42 304 aa14.96□□□□□ -0.02
NKX3-1-201ENST00000380871 OR4C6Q8NH72 309 aa14.96□□□□□ -0.02
NKX3-1-201ENST00000380871 CNOT9Q92600 299 aaKnown RBP14.96□□□□□ -0.02
NKX3-1-201ENST00000380871 SLC25A18Q9H1K4 315 aa14.96□□□□□ -0.02
NKX3-1-201ENST00000380871 FAM60AQ9NP50 221 aa14.96□□□□□ -0.02
NKX3-1-201ENST00000380871 SLC35A3Q9Y2D2 325 aa14.96□□□□□ -0.02
NKX3-1-201ENST00000380871 IDSB3KWA1 339 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 TNFP01375 233 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 TPOP07202 933 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 H2AFB2P0C5Z0 115 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 CPMP14384 443 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 CAMK2DQ13557 499 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 ANGPT1Q15389 498 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 EIPR1Q53HC9 387 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 STPG1Q5TH74 334 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 ARMC6Q6NXE6 501 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 FAAP20Q6NZ36 180 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 TPRA1Q86W33 373 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 GPALPP1Q8IXQ4 340 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 SLC22A18ASQ8N1D0 253 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 CSNK1A1LQ8N752 337 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 CAMKVQ8NCB2 501 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 PELI1Q96FA3 418 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 RANBP3Q9H6Z4 567 aaPredicted RBP14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 FLRT3Q9NZU0 649 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 EIF3KQ9UBQ5 218 aaKnown RBP14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 TRABD2BA6NFA1 517 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 C2CD4DB7Z1M9 353 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 I3L521 148 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 OR10H2O60403 315 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 RCBTB2O95199 551 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 HRGP04196 525 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 CT62P0C5K7 136 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 THEGLP0DJG4 465 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 MAZP56270 477 aaKnown RBP14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 CLDN12P56749 244 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 MAT1AQ00266 395 aaKnown RBP14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 EXOSC2Q13868 293 aaKnown RBP14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 KIR2DS3Q14952 304 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 CD276Q5ZPR3 534 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 OR52E2Q8NGJ4 325 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 HAVCR2Q8TDQ0 301 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 MED31Q9Y3C7 131 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 STX11O75558 287 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 UBL3O95164 117 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 APBB3O95704 486 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 GRPRP30550 384 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 GDI2P50395 445 aaKnown RBP14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 NRG3P56975 720 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 AMZ1Q400G9 498 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 HES5Q5TA89 166 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 AVL9Q8NBF6 648 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 OR2M2Q96R28 347 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 SERINC2Q96SA4 455 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 CHIAQ9BZP6 476 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 DLL4Q9NR61 685 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 ADAM18Q9Y3Q7 739 aa14.95□□□□□ -0.02
NKX3-1-201ENST00000380871 A0A0A6YYC8 382 aaPredicted RBP14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 G3V3Q6 166 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 I3L1I5 382 aaPredicted RBP14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 ST6GAL1P15907 406 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 ZNF3P17036 446 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 GDNFP39905 211 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 MMP15P51511 669 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 RPS11P62280 158 aaKnown RBP eCLIP14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 SNTB2Q13425 540 aaKnown RBP14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 Q6ZTK2 550 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 LUZP2Q86TE4 346 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 DHRS9Q9BPW9 319 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 SYNDIG1Q9H7V2 258 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 NTMQ9P121 344 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 URADA6NGE7 173 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 THBS1P07996 1170 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 DNASE1P24855 282 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 RPL6Q02878 288 aaKnown RBP14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 FHL1Q13642 323 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 KLF9Q13886 244 aaPredicted RBP14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 TMEM184AQ6ZMB5 413 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 ABHD13Q7L211 337 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 TOR1AIP2Q8NFQ8 470 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 FLVCR1-AS1Q8TAF5 88 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 ZNF671Q8TAW3 534 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 SARGQ9BW04 601 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 METTL17Q9H7H0 456 aaPredicted RBP14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 MCCC2Q9HCC0 563 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 RCE1Q9Y256 329 aa14.94□□□□□ -0.02
NKX3-1-201ENST00000380871 C4orf47A7E2U8 309 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 FLRT2O43155 660 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 HIST1H1CP16403 213 aaKnown RBP14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 DRD1P21728 446 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 RPS4Y1P22090 263 aaKnown RBP14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 HHEXQ03014 270 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 DGAT2L6Q6ZPD8 337 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 TMPRSS11FQ6ZWK6 438 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 OOSP2Q86WS3 158 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 CDK20Q8IZL9 346 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms