RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 EPYCQ99645 322 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 BTBD10Q9BSF8 475 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 TMEM43Q9BTV4 400 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 TAPBPLQ9BX59 468 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 PIGMQ9H3S5 423 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 KCNJ16Q9NPI9 418 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 ACTR3BQ9P1U1 418 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 PCNX1Q96RV3 2341 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 A0A1W2PNV4 684 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 LIPT2A6NK58 231 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 ARPC2O15144 300 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 SS18L1O75177 396 aaPredicted RBP11.83□□□□□ -0.52
CKAP2-202ENST00000378034 OR5F1O95221 314 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 AHSA1O95433 338 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 PLGP00747 810 aaPredicted RBP11.83□□□□□ -0.52
CKAP2-202ENST00000378034 IMPDH2P12268 514 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 TNFRSF1BP20333 461 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 OR1E2P47887 323 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 OR2B6P58173 313 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 PDK3Q15120 406 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 GUSBP1Q15486 140 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 MTX3Q5HYI7 312 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 VTCN1Q7Z7D3 282 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 MFSD8Q8NHS3 518 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 RNF217Q8TC41 542 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 ROBO4Q8WZ75 1007 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 SLC7A6OSQ96CW6 309 aaPredicted RBP11.83□□□□□ -0.52
CKAP2-202ENST00000378034 NAA11Q9BSU3 229 aaPredicted RBP11.83□□□□□ -0.52
CKAP2-202ENST00000378034 SMAD9O15198 467 aaKnown RBP11.83□□□□□ -0.52
CKAP2-202ENST00000378034 CYTIPO60759 359 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 TNFSF13O75888 250 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 BMP5P22003 454 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 TAS2R41P59536 307 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 H3F3AP84243 136 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 EGR4Q05215 589 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 FOXF2Q12947 444 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 TRIM25Q14258 630 aaKnown RBP11.83□□□□□ -0.52
CKAP2-202ENST00000378034 PAQR6Q6TCH4 344 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 DEF8Q6ZN54 512 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 FAM214BQ7L5A3 538 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 MAMDC2Q7Z304 686 aaPredicted RBP11.83□□□□□ -0.52
CKAP2-202ENST00000378034 LIX1LQ8IVB5 337 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 GCNT2Q8N0V5 402 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 PIGXQ8TBF5 258 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 LRRC46Q96FV0 321 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 SLC41A3Q96GZ6 507 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 PRRC1Q96M27 445 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 SLC19A3Q9BZV2 496 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 KLHL9Q9P2J3 617 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 EMC9Q9Y3B6 208 aa11.83□□□□□ -0.52
CKAP2-202ENST00000378034 TRAV36DV7A0A075B6V5 113 aa11.82□□□□□ -0.52
CKAP2-202ENST00000378034 FZD7O75084 574 aa11.82□□□□□ -0.52
CKAP2-202ENST00000378034 LYPD3O95274 346 aa11.82□□□□□ -0.52
CKAP2-202ENST00000378034 FPR1P21462 350 aa11.82□□□□□ -0.52
CKAP2-202ENST00000378034 MSX2P35548 267 aaPredicted RBP11.82□□□□□ -0.52
CKAP2-202ENST00000378034 KIR2DL2P43627 348 aaPredicted RBP11.82□□□□□ -0.52
CKAP2-202ENST00000378034 CTBP2P56545 445 aa11.82□□□□□ -0.52
CKAP2-202ENST00000378034 MFSD13AQ14CX5 517 aa11.82□□□□□ -0.52
CKAP2-202ENST00000378034 CDSNQ15517 529 aa11.82□□□□□ -0.52
CKAP2-202ENST00000378034 ABLIM2Q6H8Q1 611 aa11.82□□□□□ -0.52
CKAP2-202ENST00000378034 GDF7Q7Z4P5 450 aa11.82□□□□□ -0.52
CKAP2-202ENST00000378034 PYURFQ96I23 114 aa11.82□□□□□ -0.52
CKAP2-202ENST00000378034 THTPAQ9BU02 230 aa11.82□□□□□ -0.52
CKAP2-202ENST00000378034 AMBRA1Q9C0C7 1298 aa11.82□□□□□ -0.52
CKAP2-202ENST00000378034 CHST11Q9NPF2 352 aa11.82□□□□□ -0.52
CKAP2-202ENST00000378034 JKAMPQ9P055 326 aa11.82□□□□□ -0.52
CKAP2-202ENST00000378034 RIMS3Q9UJD0 308 aa11.82□□□□□ -0.52
CKAP2-202ENST00000378034 SLC7A7Q9UM01 511 aa11.82□□□□□ -0.52
CKAP2-202ENST00000378034 IGKV1D-42A0A075B6H8 117 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 CLDN1O95832 211 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 THY1P04216 161 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 RBM34P42696 430 aaKnown RBP11.81□□□□□ -0.52
CKAP2-202ENST00000378034 ASCL1P50553 236 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 RASGEF1BQ0VAM2 473 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 ST3GAL3Q11203 375 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 OR7A5Q15622 319 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 FBXL19-AS1Q494R0 122 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 FAM69AQ5T7M9 428 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 TTC33Q6PID6 262 aaPredicted RBP11.81□□□□□ -0.52
CKAP2-202ENST00000378034 TSPYL5Q86VY4 417 aaPredicted RBP11.81□□□□□ -0.52
CKAP2-202ENST00000378034 CYP4Z1Q86W10 505 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 DHFR2Q86XF0 187 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 CNEP1R1Q8N9A8 125 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 RELL2Q8NC24 303 aaPredicted RBP11.81□□□□□ -0.52
CKAP2-202ENST00000378034 OR6K3Q8NGY3 331 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 ABHD3Q8WU67 409 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 STARD4Q96DR4 205 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 ASB9Q96DX5 294 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 HS6ST2Q96MM7 605 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 ZNF426Q9BUY5 554 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 PTDSS2Q9BVG9 487 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 BCO1Q9HAY6 547 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 KLHL13Q9P2N7 655 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 FOXD3Q9UJU5 478 aaPredicted RBP11.81□□□□□ -0.52
CKAP2-202ENST00000378034 MPDZO75970 2070 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 IGKV3D-15A0A087WSY6 115 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 IGHV3-15A0A0B4J1V0 119 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 FAM90A27PA6NNH2 459 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 ZNF724A8MTY0 619 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 FTCDNL1E5RQL4 147 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms