RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 LIPAP38571 399 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 FASLGP48023 281 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 ZNF620Q6ZNG0 422 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 OR2L13Q8N349 312 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 OR4N2Q8NGD1 307 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 OR52I1Q8NGK6 324 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 ALG12Q9BV10 488 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 BCL2L14Q9BZR8 327 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 SIRT3Q9NTG7 399 aaPredicted RBP13.37□□□□□ -0.27
TCOF1-202ENST00000377797 AK6Q9Y3D8 172 aaKnown RBP13.37□□□□□ -0.27
TCOF1-202ENST00000377797 GREB1Q4ZG55 1949 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 CACNA1EQ15878 2313 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 TRAV36DV7A0A075B6V5 113 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 FUCA1P04066 466 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 GUSBP11Q6P575 273 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 Q96M85 177 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 KLF15Q9UIH9 416 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 PCDHGB2Q9Y5G2 931 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 THSD7BQ9C0I4 1608 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 PCSK6P29122 969 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 HTR1FP30939 366 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 SSR4P51571 173 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 CCL7P80098 99 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 TMEM69Q5SWH9 247 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 FRMD6Q96NE9 622 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 KLK4Q9Y5K2 254 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 UCHL1P09936 223 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 FBXO45P0C2W1 286 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 GDF1P27539 372 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 SRSF5Q13243 272 aaKnown RBP13.36□□□□□ -0.27
TCOF1-202ENST00000377797 OCLNQ16625 522 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 VASNQ6EMK4 673 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 LRRN1Q6UXK5 716 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 ZNF782Q6ZMW2 699 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-202ENST00000377797 LACC1Q8IV20 430 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 GPR32P1Q8NGA4 272 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 CCDC74BQ96LY2 380 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 ARRDC1-AS1Q9H2J1 176 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 CHMP1AQ9HD42 196 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-202ENST00000377797 SPTA1P02549 2419 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 PCM1Q15154 2024 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 KDM4EB2RXH2 506 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-202ENST00000377797 ACOT7O00154 380 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 KDM4BO94953 1096 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 FRKP42685 505 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-202ENST00000377797 FAM189A2Q15884 450 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 DPY19L2P2Q6ZN68 376 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 ZNF100Q8IYN0 542 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 FAM26EQ8N5C1 309 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 GPR148Q8TDV2 347 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 CENPOQ9BU64 300 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 ZSWIM8A7E2V4 1837 aa13.36□□□□□ -0.27
TCOF1-202ENST00000377797 NCOR1O75376 2440 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 TMEM72A0PK05 275 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 CTDSP2O14595 271 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 EIF4E2O60573 245 aaKnown RBP13.35□□□□□ -0.27
TCOF1-202ENST00000377797 ZGLP1P0C6A0 271 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 ZXDCQ2QGD7 858 aaPredicted RBP13.35□□□□□ -0.27
TCOF1-202ENST00000377797 RPS19BP1Q86WX3 136 aaKnown RBP13.35□□□□□ -0.27
TCOF1-202ENST00000377797 OR13C3Q8NGS6 347 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 ABCG5Q9H222 651 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 CACNA1IQ9P0X4 2223 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 MEN1O00255 615 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 RBM34P42696 430 aaKnown RBP13.35□□□□□ -0.27
TCOF1-202ENST00000377797 HES5Q5TA89 166 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 CCBE1Q6UXH8 406 aaPredicted RBP13.35□□□□□ -0.27
TCOF1-202ENST00000377797 GALNT6Q8NCL4 622 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 SYT4Q9H2B2 425 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 HTR3EA5X5Y0 456 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 A8MVM7 634 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 GABARAPO95166 117 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 OR8G3PP0DMU2 310 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 CFL1P23528 166 aaKnown RBP13.35□□□□□ -0.27
TCOF1-202ENST00000377797 ZNF511Q8NB15 262 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 FUZQ9BT04 418 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 FN3KQ9H479 309 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 CDHR4A6H8M9 788 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 LRRTM2O43300 516 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 OR7A10O76100 309 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 IGHEP01854 428 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 SCG5P05408 212 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 CD40LGP29965 261 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 BCL2L15Q5TBC7 163 aa13.35□□□□□ -0.27
TCOF1-202ENST00000377797 HINT3Q9NQE9 182 aaKnown RBP13.35□□□□□ -0.27
TCOF1-202ENST00000377797 A0A1W2PS29 197 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 FOLR1P15328 257 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 CTBP2P56545 445 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 CSNK2A1P68400 391 aaPredicted RBP13.34□□□□□ -0.27
TCOF1-202ENST00000377797 SCGB2B2Q4G0G5 96 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 MRM1Q6IN84 353 aaKnown RBP13.34□□□□□ -0.27
TCOF1-202ENST00000377797 FAM180AQ6UWF9 173 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 C5orf46Q6UWT4 87 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 RASD2Q96D21 266 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 BEX2Q9BXY8 128 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 BEX1Q9HBH7 125 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 CTSFQ9UBX1 484 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 A4GNTQ9UNA3 340 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 PATJQ8NI35 1801 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 CNOT1A5YKK6 2376 aaKnown RBP13.34□□□□□ -0.27
TCOF1-202ENST00000377797 F10P00742 488 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms