RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 H2BFMP0C1H6 154 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 HIST1H1TP22492 207 aaPredicted RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 SCAND1P57086 179 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 CBX2Q14781 532 aaPredicted RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 ZFAND6Q6FIF0 208 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 CAPN13Q6MZZ7 669 aaPredicted RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 GLB1LQ6UWU2 654 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 CDHR3Q6ZTQ4 885 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 MRPL50Q8N5N7 158 aaKnown RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 ANKRD52Q8NB46 1076 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 CXorf40AQ8TE69 158 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 SCARB1Q8WTV0 552 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 HCAR1Q9BXC0 346 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 GABARAPL1Q9H0R8 117 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 RBKSQ9H477 322 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 MS4A12Q9NXJ0 267 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 TMEM184BQ9Y519 407 aaPredicted RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 LRRC9Q6ZRR7 1453 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 ZNF724A8MTY0 619 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 CHADO15335 359 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 FFAR2O15552 330 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 STBD1O95210 358 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 PDE8BO95263 885 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 F12P00748 615 aaPredicted RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 JCHAINP01591 159 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 TRGC2P03986 189 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 ADORA3P0DMS8 318 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 CDK4P11802 303 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 SSTR2P30874 369 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 LIFRP42702 1097 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 RELAQ04206 551 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 FUT2Q10981 343 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 GPR19Q15760 415 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 FAHD2BQ6P2I3 314 aaPredicted RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 C17orf107Q6ZR85 190 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 SLC46A3Q7Z3Q1 461 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 CCDC190Q86UF4 302 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 ZNF761Q86XN6 746 aaPredicted RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 DMBX1Q8NFW5 382 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 OR51T1Q8NGJ9 327 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 SLC35C1Q96A29 364 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 NSUN3Q9H649 340 aaKnown RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 CALHM2Q9HA72 323 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 TAF9BQ9HBM6 251 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 RASL12Q9NYN1 266 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 PIN4Q9Y237 131 aaKnown RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 YLPM1P49750 1951 aaKnown RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 A0A1W2PPQ1 181 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 A0A1W2PQ09 198 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 EPHB6O15197 1021 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 LIPFP07098 398 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 PRSS1P07477 247 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 DAP3P51398 398 aaKnown RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 OR1D5P58170 312 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 NKX3-2P78367 333 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 LDB1Q86U70 411 aaPredicted RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 TMEM116Q8NCL8 245 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 IL17RDQ8NFM7 739 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 LILRB1Q8NHL6 650 aaPredicted RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 HMGB4Q8WW32 186 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 PRMT6Q96LA8 375 aaPredicted RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 PRELID3AQ96N28 172 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 ZNF641Q96N77 438 aaPredicted RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 TRIP12Q14669 1992 aaPredicted RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 GPR39O43194 453 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 JTBO76095 146 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 LSM8O95777 96 aaKnown RBP5.6□□□□□ -1.51
SCN2A-202ENST00000375427 SLC35G6P0C7Q6 338 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 BEX5Q5H9J7 111 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 OR2T5Q6IEZ7 315 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 ALKAL2Q6UX46 152 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 AQP11Q8NBQ7 271 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 OR2T29Q8NH02 315 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 STYXQ8WUJ0 223 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 SLC22A18Q96BI1 424 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 AMBRA1Q9C0C7 1298 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 CPQQ9Y646 472 aa5.6□□□□□ -1.51
SCN2A-202ENST00000375427 EP300Q09472 2414 aaPredicted RBP5.59□□□□□ -1.51
SCN2A-202ENST00000375427 C1orf226A1L170 272 aa5.59□□□□□ -1.51
SCN2A-202ENST00000375427 RCCD1A6NED2 376 aa5.59□□□□□ -1.51
SCN2A-202ENST00000375427 DHRS7CA6NNS2 312 aa5.59□□□□□ -1.51
SCN2A-202ENST00000375427 XYLBO75191 536 aa5.59□□□□□ -1.51
SCN2A-202ENST00000375427 OR8G2PQ6IF36 304 aa5.59□□□□□ -1.51
SCN2A-202ENST00000375427 SLC26A9Q7LBE3 791 aa5.59□□□□□ -1.51
SCN2A-202ENST00000375427 OR52E4Q8NGH9 312 aa5.59□□□□□ -1.51
SCN2A-202ENST00000375427 OR4C13Q8NGP0 309 aa5.59□□□□□ -1.51
SCN2A-202ENST00000375427 Q8WTZ3 238 aa5.59□□□□□ -1.51
SCN2A-202ENST00000375427 ADAT3Q96EY9 351 aaPredicted RBP5.59□□□□□ -1.51
SCN2A-202ENST00000375427 FAM84AQ96KN4 292 aa5.59□□□□□ -1.51
SCN2A-202ENST00000375427 RSPO3Q9BXY4 272 aaPredicted RBP5.59□□□□□ -1.51
SCN2A-202ENST00000375427 FBXO44Q9H4M3 255 aa5.59□□□□□ -1.51
SCN2A-202ENST00000375427 RPF2Q9H7B2 306 aaKnown RBP5.59□□□□□ -1.51
SCN2A-202ENST00000375427 WIZO95785 1651 aa5.59□□□□□ -1.51
SCN2A-202ENST00000375427 SORL1Q92673 2214 aa5.59□□□□□ -1.51
SCN2A-202ENST00000375427 H7C1C5 153 aa5.59□□□□□ -1.51
SCN2A-202ENST00000375427 PRAMEF4O60810 478 aa5.59□□□□□ -1.51
SCN2A-202ENST00000375427 ACAA1P09110 424 aaPredicted RBP5.59□□□□□ -1.51
SCN2A-202ENST00000375427 PRSS56P0CW18 603 aa5.59□□□□□ -1.51
SCN2A-202ENST00000375427 SLC6A8P48029 635 aa5.59□□□□□ -1.51
SCN2A-202ENST00000375427 NUMBP49757 651 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms