RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 SLC38A4Q969I6 547 aa14.27□□□□□ -0.12
HDHD3-202ENST00000374180 FAM162AQ96A26 154 aa14.27□□□□□ -0.12
HDHD3-202ENST00000374180 STARD4Q96DR4 205 aa14.27□□□□□ -0.12
HDHD3-202ENST00000374180 LRRC46Q96FV0 321 aa14.27□□□□□ -0.12
HDHD3-202ENST00000374180 PIGMQ9H3S5 423 aa14.27□□□□□ -0.12
HDHD3-202ENST00000374180 EMC9Q9Y3B6 208 aa14.27□□□□□ -0.12
HDHD3-202ENST00000374180 CPSF4LA6NMK7 179 aaKnown RBP14.26□□□□□ -0.13
HDHD3-202ENST00000374180 TMEM229AB2RXF0 380 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 EIF1BO60739 113 aaKnown RBP14.26□□□□□ -0.13
HDHD3-202ENST00000374180 SS18L1O75177 396 aaPredicted RBP14.26□□□□□ -0.13
HDHD3-202ENST00000374180 SMNDC1O75940 238 aaKnown RBP eCLIP14.26□□□□□ -0.13
HDHD3-202ENST00000374180 ZNF682O95780 498 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 GPIP06744 558 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 IMPDH2P12268 514 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 HSD17B1P14061 328 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 FPR1P21462 350 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 IDUAP35475 653 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 CPOXP36551 454 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 OR1E2P47887 323 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 ASCL1P50553 236 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 CDH12P55289 794 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 SLC35A1P78382 337 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 CEACAM7Q14002 265 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 GUSBP1Q15486 140 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 SWT1Q5T5J6 900 aaKnown RBP14.26□□□□□ -0.13
HDHD3-202ENST00000374180 C1orf140Q5VVS0 124 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 VWA1Q6PCB0 445 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 BTLAQ7Z6A9 289 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 FAM156AQ8NDB6 213 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 CD300AQ9UGN4 299 aa14.26□□□□□ -0.13
HDHD3-202ENST00000374180 RRP15Q9Y3B9 282 aaKnown RBP14.26□□□□□ -0.13
HDHD3-202ENST00000374180 A0A087WUJ7 227 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 C19orf84I3L1E1 186 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 SMAD9O15198 467 aaKnown RBP14.25□□□□□ -0.13
HDHD3-202ENST00000374180 CYTIPO60759 359 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 NPIPB7O75200 414 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 AHSA1O95433 338 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 SERPINA1P01009 418 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 KLK2P20151 261 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 RASGEF1BQ0VAM2 473 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 SPATS1Q496A3 300 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 TMEM201Q5SNT2 666 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 RINLQ6ZS11 566 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 CBLL1Q75N03 491 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 LUZP2Q86TE4 346 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 ADAMTS16Q8TE57 1224 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 NAA11Q9BSU3 229 aaPredicted RBP14.25□□□□□ -0.13
HDHD3-202ENST00000374180 TAPBPLQ9BX59 468 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 PCDHAC1Q9H158 963 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 GP6Q9HCN6 339 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 CELSR2Q9HCU4 2923 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 JKAMPQ9P055 326 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 KLHL9Q9P2J3 617 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 TRAPPC13A5PLN9 417 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 LIPT2A6NK58 231 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 MSTNO14793 375 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 UBOX5O94941 541 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 MSX2P35548 267 aaPredicted RBP14.25□□□□□ -0.13
HDHD3-202ENST00000374180 H3F3AP84243 136 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 EGR4Q05215 589 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 OR7A5Q15622 319 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 FBXL19-AS1Q494R0 122 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 HIST2H2BCQ6DN03 193 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 C5orf46Q6UWT4 87 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 DEF8Q6ZN54 512 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 FKBP9P1Q75LS8 142 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 VTCN1Q7Z7D3 282 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 TUSC5Q8IXB3 177 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 KLHL13Q9P2N7 655 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 RPS6KA6Q9UK32 745 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 PROCRQ9UNN8 238 aa14.25□□□□□ -0.13
HDHD3-202ENST00000374180 A8MXE2 369 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 CHP2O43745 196 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 CGAP01215 116 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 YES1P07947 543 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 UQCRC1P31930 480 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 RPS5P46782 204 aaKnown RBP14.24□□□□□ -0.13
HDHD3-202ENST00000374180 TAS2R41P59536 307 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 PAQR6Q6TCH4 344 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 TSPYL5Q86VY4 417 aaPredicted RBP14.24□□□□□ -0.13
HDHD3-202ENST00000374180 P3H2Q8IVL5 708 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 CCDC103Q8IW40 242 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 ARHGAP24Q8N264 748 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 OR6K3Q8NGY3 331 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 MFSD8Q8NHS3 518 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 RNASE6Q93091 150 aaKnown RBP14.24□□□□□ -0.13
HDHD3-202ENST00000374180 SLC25A36Q96CQ1 311 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 KTI12Q96EK9 354 aaPredicted RBP14.24□□□□□ -0.13
HDHD3-202ENST00000374180 PSD2Q9BQI7 771 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 TACO1Q9BSH4 297 aaKnown RBP14.24□□□□□ -0.13
HDHD3-202ENST00000374180 RBM24Q9BX46 236 aaKnown RBP14.24□□□□□ -0.13
HDHD3-202ENST00000374180 POLR2J2Q9GZM3 115 aaKnown RBP14.24□□□□□ -0.13
HDHD3-202ENST00000374180 POLR2J3Q9H1A7 115 aaKnown RBP14.24□□□□□ -0.13
HDHD3-202ENST00000374180 C1orf21Q9H246 121 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 GORASP2Q9H8Y8 452 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 NPDC1Q9NQX5 325 aaPredicted RBP14.24□□□□□ -0.13
HDHD3-202ENST00000374180 PLSCR4Q9NRQ2 329 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 DCAF13Q9NV06 445 aaKnown RBP14.24□□□□□ -0.13
HDHD3-202ENST00000374180 TAS2R1Q9NYW7 299 aa14.24□□□□□ -0.13
HDHD3-202ENST00000374180 MAGEL2Q9UJ55 1249 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms