RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 TMIGD3P0DMS9 266 aaPredicted RBP16.42■□□□□ 0.22
PBX3-205ENST00000373492 CDH12P55289 794 aa16.42■□□□□ 0.22
PBX3-205ENST00000373492 TAS2R41P59536 307 aa16.42■□□□□ 0.22
PBX3-205ENST00000373492 MYBPHQ13203 477 aa16.42■□□□□ 0.22
PBX3-205ENST00000373492 TRIM25Q14258 630 aaKnown RBP16.42■□□□□ 0.22
PBX3-205ENST00000373492 ZNF239Q16600 458 aaKnown RBP16.42■□□□□ 0.22
PBX3-205ENST00000373492 MCEMP1Q8IX19 187 aa16.42■□□□□ 0.22
PBX3-205ENST00000373492 ARL5BQ96KC2 179 aa16.42■□□□□ 0.22
PBX3-205ENST00000373492 UCK2Q9BZX2 261 aa16.42■□□□□ 0.22
PBX3-205ENST00000373492 ACTR3BQ9P1U1 418 aa16.42■□□□□ 0.22
PBX3-205ENST00000373492 ZNF629Q9UEG4 869 aaPredicted RBP16.42■□□□□ 0.22
PBX3-205ENST00000373492 TRAPPC4Q9Y296 219 aa16.42■□□□□ 0.22
PBX3-205ENST00000373492 A0A087WUJ7 227 aa16.41■□□□□ 0.22
PBX3-205ENST00000373492 FAM90A27PA6NNH2 459 aa16.41■□□□□ 0.22
PBX3-205ENST00000373492 DNPH1O43598 174 aa16.41■□□□□ 0.22
PBX3-205ENST00000373492 DNAJC8O75937 253 aaPredicted RBP16.41■□□□□ 0.22
PBX3-205ENST00000373492 ENPP1P22413 925 aa16.41■□□□□ 0.22
PBX3-205ENST00000373492 IDUAP35475 653 aa16.41■□□□□ 0.22
PBX3-205ENST00000373492 OR2B6P58173 313 aa16.41■□□□□ 0.22
PBX3-205ENST00000373492 TFF3Q07654 80 aa16.41■□□□□ 0.22
PBX3-205ENST00000373492 MTX3Q5HYI7 312 aa16.41■□□□□ 0.22
PBX3-205ENST00000373492 DHFR2Q86XF0 187 aa16.41■□□□□ 0.22
PBX3-205ENST00000373492 MCUR1Q96AQ8 359 aa16.41■□□□□ 0.22
PBX3-205ENST00000373492 INTS12Q96CB8 462 aaKnown RBP16.41■□□□□ 0.22
PBX3-205ENST00000373492 ASB9Q96DX5 294 aa16.41■□□□□ 0.22
PBX3-205ENST00000373492 DNAJA3Q96EY1 480 aa16.41■□□□□ 0.22
PBX3-205ENST00000373492 SPOCK3Q9BQ16 436 aa16.41■□□□□ 0.22
PBX3-205ENST00000373492 TAPBPLQ9BX59 468 aa16.41■□□□□ 0.22
PBX3-205ENST00000373492 SRXN1Q9BYN0 137 aa16.41■□□□□ 0.22
PBX3-205ENST00000373492 SLC7A7Q9UM01 511 aa16.41■□□□□ 0.22
PBX3-205ENST00000373492 FREM1Q5H8C1 2179 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 ZC3H12DA2A288 527 aaKnown RBP16.4■□□□□ 0.22
PBX3-205ENST00000373492 NKX2-6A6NCS4 301 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 CYSRT1A8MQ03 144 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 C19orf84I3L1E1 186 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 EBAG9O00559 213 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 DVL2O14641 736 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 OR5F1O95221 314 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 AHSA1O95433 338 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 PLGP00747 810 aaPredicted RBP16.4■□□□□ 0.22
PBX3-205ENST00000373492 GPIP06744 558 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 CRHP06850 196 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 COX6B1P14854 86 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 CTSSP25774 331 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 SLC35A1P78382 337 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 RNPS1Q15287 305 aaKnown RBP16.4■□□□□ 0.22
PBX3-205ENST00000373492 EEF1A1P5Q5VTE0 462 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 C1orf140Q5VVS0 124 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 CCDC121Q6ZUS5 278 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 FCRLAQ7L513 359 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 CYP4Z1Q86W10 505 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 LIX1LQ8IVB5 337 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 GCNT2Q8N0V5 402 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 SLC43A2Q8N370 569 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 ACBD4Q8NC06 268 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 NAXEQ8NCW5 288 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 ROBO4Q8WZ75 1007 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 CCDC124Q96CT7 223 aaKnown RBP16.4■□□□□ 0.22
PBX3-205ENST00000373492 SLC41A3Q96GZ6 507 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 MPP4Q96JB8 637 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 CLPTM1LQ96KA5 538 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 PRRC1Q96M27 445 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 EPYCQ99645 322 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 NAA11Q9BSU3 229 aaPredicted RBP16.4■□□□□ 0.22
PBX3-205ENST00000373492 AMBRA1Q9C0C7 1298 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 ENKD1Q9H0I2 346 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 RNF122Q9H9V4 155 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 GLRX2Q9NS18 164 aa16.4■□□□□ 0.22
PBX3-205ENST00000373492 CENPEQ02224 2701 aa16.39■□□□□ 0.22
PBX3-205ENST00000373492 OR2T1O43869 369 aa16.39■□□□□ 0.21
PBX3-205ENST00000373492 EIF1BO60739 113 aaKnown RBP16.39■□□□□ 0.21
PBX3-205ENST00000373492 AQP8O94778 261 aa16.39■□□□□ 0.21
PBX3-205ENST00000373492 PRKD3O94806 890 aa16.39■□□□□ 0.21
PBX3-205ENST00000373492 IL18BPO95998 194 aa16.39■□□□□ 0.21
PBX3-205ENST00000373492 GTF2E2P29084 291 aaKnown RBP16.39■□□□□ 0.21
PBX3-205ENST00000373492 OPRM1P35372 400 aa16.39■□□□□ 0.21
PBX3-205ENST00000373492 TTC33Q6PID6 262 aaPredicted RBP16.39■□□□□ 0.21
PBX3-205ENST00000373492 CYP2R1Q6VVX0 501 aa16.39■□□□□ 0.21
PBX3-205ENST00000373492 GDF7Q7Z4P5 450 aa16.39■□□□□ 0.21
PBX3-205ENST00000373492 RNF128Q8TEB7 428 aa16.39■□□□□ 0.21
PBX3-205ENST00000373492 POP5Q969H6 163 aaKnown RBP16.39■□□□□ 0.21
PBX3-205ENST00000373492 MARVELD3Q96A59 401 aa16.39■□□□□ 0.21
PBX3-205ENST00000373492 PYURFQ96I23 114 aa16.39■□□□□ 0.21
PBX3-205ENST00000373492 LRGUKQ96M69 825 aa16.39■□□□□ 0.21
PBX3-205ENST00000373492 TMEM43Q9BTV4 400 aa16.39■□□□□ 0.21
PBX3-205ENST00000373492 SFXN3Q9BWM7 321 aa16.39■□□□□ 0.21
PBX3-205ENST00000373492 RIMS3Q9UJD0 308 aa16.39■□□□□ 0.21
PBX3-205ENST00000373492 V9GYQ6 96 aa16.39■□□□□ 0.21
PBX3-205ENST00000373492 NPIPB7O75200 414 aa16.38■□□□□ 0.21
PBX3-205ENST00000373492 THRBP10828 461 aa16.38■□□□□ 0.21
PBX3-205ENST00000373492 IMPDH2P12268 514 aa16.38■□□□□ 0.21
PBX3-205ENST00000373492 FPR1P21462 350 aa16.38■□□□□ 0.21
PBX3-205ENST00000373492 RPS5P46782 204 aaKnown RBP16.38■□□□□ 0.21
PBX3-205ENST00000373492 CTBP2P56545 445 aa16.38■□□□□ 0.21
PBX3-205ENST00000373492 EGR4Q05215 589 aa16.38■□□□□ 0.21
PBX3-205ENST00000373492 ST3GAL3Q11203 375 aa16.38■□□□□ 0.21
PBX3-205ENST00000373492 TRAP1Q12931 704 aaKnown RBP16.38■□□□□ 0.21
PBX3-205ENST00000373492 PIN1Q13526 163 aaPredicted RBP16.38■□□□□ 0.21
PBX3-205ENST00000373492 OR7A5Q15622 319 aa16.38■□□□□ 0.21
PBX3-205ENST00000373492 LCN8Q6JVE9 175 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms