RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 C1orf140Q5VVS0 124 aa16.4■□□□□ 0.22
PBX3-202ENST00000373482 CCDC121Q6ZUS5 278 aa16.4■□□□□ 0.22
PBX3-202ENST00000373482 FCRLAQ7L513 359 aa16.4■□□□□ 0.22
PBX3-202ENST00000373482 CYP4Z1Q86W10 505 aa16.4■□□□□ 0.22
PBX3-202ENST00000373482 CCDC71Q8IV32 467 aaPredicted RBP16.4■□□□□ 0.22
PBX3-202ENST00000373482 GCNT2Q8N0V5 402 aa16.4■□□□□ 0.22
PBX3-202ENST00000373482 SLC43A2Q8N370 569 aa16.4■□□□□ 0.22
PBX3-202ENST00000373482 ROBO4Q8WZ75 1007 aa16.4■□□□□ 0.22
PBX3-202ENST00000373482 CCDC124Q96CT7 223 aaKnown RBP16.4■□□□□ 0.22
PBX3-202ENST00000373482 SLC41A3Q96GZ6 507 aa16.4■□□□□ 0.22
PBX3-202ENST00000373482 MPP4Q96JB8 637 aa16.4■□□□□ 0.22
PBX3-202ENST00000373482 CLPTM1LQ96KA5 538 aa16.4■□□□□ 0.22
PBX3-202ENST00000373482 PRRC1Q96M27 445 aa16.4■□□□□ 0.22
PBX3-202ENST00000373482 EPYCQ99645 322 aa16.4■□□□□ 0.22
PBX3-202ENST00000373482 NAA11Q9BSU3 229 aaPredicted RBP16.4■□□□□ 0.22
PBX3-202ENST00000373482 AMBRA1Q9C0C7 1298 aa16.4■□□□□ 0.22
PBX3-202ENST00000373482 RNF122Q9H9V4 155 aa16.4■□□□□ 0.22
PBX3-202ENST00000373482 GLRX2Q9NS18 164 aa16.4■□□□□ 0.22
PBX3-202ENST00000373482 ZNF629Q9UEG4 869 aaPredicted RBP16.4■□□□□ 0.22
PBX3-202ENST00000373482 OR2T1O43869 369 aa16.39■□□□□ 0.21
PBX3-202ENST00000373482 EIF1BO60739 113 aaKnown RBP16.39■□□□□ 0.21
PBX3-202ENST00000373482 AQP8O94778 261 aa16.39■□□□□ 0.21
PBX3-202ENST00000373482 PRKD3O94806 890 aa16.39■□□□□ 0.21
PBX3-202ENST00000373482 CLDN14O95500 239 aa16.39■□□□□ 0.21
PBX3-202ENST00000373482 GTF2E2P29084 291 aaKnown RBP16.39■□□□□ 0.21
PBX3-202ENST00000373482 OPRM1P35372 400 aa16.39■□□□□ 0.21
PBX3-202ENST00000373482 TTC33Q6PID6 262 aaPredicted RBP16.39■□□□□ 0.21
PBX3-202ENST00000373482 CYP2R1Q6VVX0 501 aa16.39■□□□□ 0.21
PBX3-202ENST00000373482 GDF7Q7Z4P5 450 aa16.39■□□□□ 0.21
PBX3-202ENST00000373482 NAXEQ8NCW5 288 aa16.39■□□□□ 0.21
PBX3-202ENST00000373482 RNF128Q8TEB7 428 aa16.39■□□□□ 0.21
PBX3-202ENST00000373482 POP5Q969H6 163 aaKnown RBP16.39■□□□□ 0.21
PBX3-202ENST00000373482 PYURFQ96I23 114 aa16.39■□□□□ 0.21
PBX3-202ENST00000373482 LRGUKQ96M69 825 aa16.39■□□□□ 0.21
PBX3-202ENST00000373482 TMEM43Q9BTV4 400 aa16.39■□□□□ 0.21
PBX3-202ENST00000373482 SFXN3Q9BWM7 321 aa16.39■□□□□ 0.21
PBX3-202ENST00000373482 RIMS3Q9UJD0 308 aa16.39■□□□□ 0.21
PBX3-202ENST00000373482 V9GYQ6 96 aa16.39■□□□□ 0.21
PBX3-202ENST00000373482 USP9XQ93008 2570 aaPredicted RBP16.38■□□□□ 0.21
PBX3-202ENST00000373482 NPIPB7O75200 414 aa16.38■□□□□ 0.21
PBX3-202ENST00000373482 IL18BPO95998 194 aa16.38■□□□□ 0.21
PBX3-202ENST00000373482 THRBP10828 461 aa16.38■□□□□ 0.21
PBX3-202ENST00000373482 IMPDH2P12268 514 aa16.38■□□□□ 0.21
PBX3-202ENST00000373482 FPR1P21462 350 aa16.38■□□□□ 0.21
PBX3-202ENST00000373482 RPS5P46782 204 aaKnown RBP16.38■□□□□ 0.21
PBX3-202ENST00000373482 CTBP2P56545 445 aa16.38■□□□□ 0.21
PBX3-202ENST00000373482 EGR4Q05215 589 aa16.38■□□□□ 0.21
PBX3-202ENST00000373482 ST3GAL3Q11203 375 aa16.38■□□□□ 0.21
PBX3-202ENST00000373482 TRAP1Q12931 704 aaKnown RBP16.38■□□□□ 0.21
PBX3-202ENST00000373482 PIN1Q13526 163 aaPredicted RBP16.38■□□□□ 0.21
PBX3-202ENST00000373482 OR7A5Q15622 319 aa16.38■□□□□ 0.21
PBX3-202ENST00000373482 LCN8Q6JVE9 175 aa16.38■□□□□ 0.21
PBX3-202ENST00000373482 LILRB4Q8NHJ6 448 aa16.38■□□□□ 0.21
PBX3-202ENST00000373482 MFSD8Q8NHS3 518 aa16.38■□□□□ 0.21
PBX3-202ENST00000373482 GMPPAQ96IJ6 420 aaPredicted RBP16.38■□□□□ 0.21
PBX3-202ENST00000373482 FNDC11Q9BVV2 318 aa16.38■□□□□ 0.21
PBX3-202ENST00000373482 TRIM15Q9C019 465 aa16.38■□□□□ 0.21
PBX3-202ENST00000373482 KLHL9Q9P2J3 617 aa16.38■□□□□ 0.21
PBX3-202ENST00000373482 FAM32AQ9Y421 112 aaKnown RBP16.38■□□□□ 0.21
PBX3-202ENST00000373482 ICE1Q9Y2F5 2266 aa16.38■□□□□ 0.21
PBX3-202ENST00000373482 TRAV36DV7A0A075B6V5 113 aa16.37■□□□□ 0.21
PBX3-202ENST00000373482 IGHV3-15A0A0B4J1V0 119 aa16.37■□□□□ 0.21
PBX3-202ENST00000373482 LIPT2A6NK58 231 aa16.37■□□□□ 0.21
PBX3-202ENST00000373482 SMAD9O15198 467 aaKnown RBP16.37■□□□□ 0.21
PBX3-202ENST00000373482 GSC2O15499 205 aa16.37■□□□□ 0.21
PBX3-202ENST00000373482 RNF224P0DH78 156 aa16.37■□□□□ 0.21
PBX3-202ENST00000373482 ITGA2P17301 1181 aa16.37■□□□□ 0.21
PBX3-202ENST00000373482 ATP6V1B2P21281 511 aa16.37■□□□□ 0.21
PBX3-202ENST00000373482 BMP5P22003 454 aa16.37■□□□□ 0.21
PBX3-202ENST00000373482 YAP1P46937 504 aaKnown RBP16.37■□□□□ 0.21
PBX3-202ENST00000373482 AGFG1P52594 562 aaKnown RBP16.37■□□□□ 0.21
PBX3-202ENST00000373482 SLC25A35Q3KQZ1 300 aa16.37■□□□□ 0.21
PBX3-202ENST00000373482 FAM69AQ5T7M9 428 aa16.37■□□□□ 0.21
PBX3-202ENST00000373482 LINC00114Q6XXX2 140 aa16.37■□□□□ 0.21
PBX3-202ENST00000373482 TSPYL5Q86VY4 417 aaPredicted RBP16.37■□□□□ 0.21
PBX3-202ENST00000373482 CNEP1R1Q8N9A8 125 aa16.37■□□□□ 0.21
PBX3-202ENST00000373482 PIGXQ8TBF5 258 aa16.37■□□□□ 0.21
PBX3-202ENST00000373482 SLC25A36Q96CQ1 311 aa16.37■□□□□ 0.21
PBX3-202ENST00000373482 KTI12Q96EK9 354 aaPredicted RBP16.37■□□□□ 0.21
PBX3-202ENST00000373482 TACO1Q9BSH4 297 aaKnown RBP16.37■□□□□ 0.21
PBX3-202ENST00000373482 MMADHCQ9H3L0 296 aaPredicted RBP16.37■□□□□ 0.21
PBX3-202ENST00000373482 GP6Q9HCN6 339 aa16.37■□□□□ 0.21
PBX3-202ENST00000373482 A4GNTQ9UNA3 340 aa16.37■□□□□ 0.21
PBX3-202ENST00000373482 EMC9Q9Y3B6 208 aa16.37■□□□□ 0.21
PBX3-202ENST00000373482 A0A1W2PNV4 684 aa16.36■□□□□ 0.21
PBX3-202ENST00000373482 FAM90A27PA6NNH2 459 aa16.36■□□□□ 0.21
PBX3-202ENST00000373482 CYTIPO60759 359 aa16.36■□□□□ 0.21
PBX3-202ENST00000373482 THY1P04216 161 aa16.36■□□□□ 0.21
PBX3-202ENST00000373482 MS4A2Q01362 244 aa16.36■□□□□ 0.21
PBX3-202ENST00000373482 RASGEF1BQ0VAM2 473 aa16.36■□□□□ 0.21
PBX3-202ENST00000373482 FOXF2Q12947 444 aa16.36■□□□□ 0.21
PBX3-202ENST00000373482 MFSD13AQ14CX5 517 aa16.36■□□□□ 0.21
PBX3-202ENST00000373482 PGM2L1Q6PCE3 622 aa16.36■□□□□ 0.21
PBX3-202ENST00000373482 PAQR6Q6TCH4 344 aa16.36■□□□□ 0.21
PBX3-202ENST00000373482 FAM214BQ7L5A3 538 aa16.36■□□□□ 0.21
PBX3-202ENST00000373482 OFCC1Q8IZS5 231 aa16.36■□□□□ 0.21
PBX3-202ENST00000373482 FAM86B1Q8N7N1 296 aa16.36■□□□□ 0.21
PBX3-202ENST00000373482 ABHD3Q8WU67 409 aa16.36■□□□□ 0.21
PBX3-202ENST00000373482 LRRC46Q96FV0 321 aa16.36■□□□□ 0.21
PBX3-202ENST00000373482 HS6ST2Q96MM7 605 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms