RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 SORCS2Q96PQ0 1159 aa11.42□□□□□ -0.58
TRAPPC3-201ENST00000373159 PIF1Q9H611 641 aa11.42□□□□□ -0.58
TRAPPC3-201ENST00000373159 CHODLQ9H9P2 273 aa11.42□□□□□ -0.58
TRAPPC3-201ENST00000373159 MYOZ1Q9NP98 299 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC3-201ENST00000373159 OBP2BQ9NPH6 170 aa11.42□□□□□ -0.58
TRAPPC3-201ENST00000373159 NOP53Q9NZM5 478 aaKnown RBP11.42□□□□□ -0.58
TRAPPC3-201ENST00000373159 OSGIN1Q9UJX0 560 aa11.42□□□□□ -0.58
TRAPPC3-201ENST00000373159 TMED7Q9Y3B3 224 aa11.42□□□□□ -0.58
TRAPPC3-201ENST00000373159 IGHV4-61A0A0C4DH41 118 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 TMEM72A0PK05 275 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 PRAMEF27A3QJZ7 478 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 CLDN24A6NM45 220 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 HAX1O00165 279 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 FAAHO00519 579 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 APEHP13798 732 aaKnown RBP11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 HNF1AP20823 631 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 SERPINF1P36955 418 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 SLC1A3P43003 542 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 POLR2HP52434 150 aaKnown RBP11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 SRSF2Q01130 221 aaKnown RBP11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 SQLEQ14534 574 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 ANXA8L1Q5VT79 327 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 LIPNQ5VXI9 398 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 SAXO2Q658L1 398 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 TNFAIP8L2Q6P589 184 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 IL17RELQ6ZVW7 336 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 CMIPQ8IY22 773 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 VPS37AQ8NEZ2 397 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 TCP10LQ8TDR4 215 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 NEURL3Q96EH8 262 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 ZIM3Q96PE6 472 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 SF3B5Q9BWJ5 86 aaKnown RBP11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 TMEM45AQ9NWC5 275 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 PRDM4Q9UKN5 801 aa11.41□□□□□ -0.58
TRAPPC3-201ENST00000373159 TLDC2A0PJX2 215 aa11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 AGAP5A6NIR3 686 aa11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 B9A039 149 aa11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 AP3D1O14617 1153 aa11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 KLF11O14901 512 aa11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 CPSF4O95639 269 aaKnown RBP11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 TGFAP01135 160 aa11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 NUDT17P0C025 328 aa11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 ZNF23P17027 643 aa11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 TACR3P29371 465 aa11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 SNRPD2P62316 118 aaKnown RBP11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 GSTA3Q16772 222 aa11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 HIKESHIQ53FT3 197 aa11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 KLHL24Q6TFL4 600 aa11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 AAED1Q7RTV5 226 aa11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 ABHD12BQ7Z5M8 362 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 HMGN2P46Q86SG4 172 aa11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 ANKRD46Q86W74 232 aa11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 OR9K2Q8NGE7 335 aa11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 TRNT1Q96Q11 434 aaKnown RBP11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 ADAM19Q9H013 955 aa11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 MTHFD2LQ9H903 347 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC3-201ENST00000373159 IGHV1-18A0A0C4DH31 117 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 ZC3H12DA2A288 527 aaKnown RBP11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 LIPT2A6NK58 231 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 HMGN4O00479 90 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 SPAG7O75391 227 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 PDE5AO76074 875 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 CRYAAP02489 173 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 PGRP06401 933 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 BPGMP07738 259 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 CDH2P19022 906 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 KHKP50053 298 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 CASP8Q14790 479 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 EFNB3Q15768 340 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 ADIPOQQ15848 244 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 IQCCQ4KMZ1 466 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 GPAT3Q53EU6 434 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 OTUD3Q5T2D3 398 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 ANKRD16Q6P6B7 361 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 SLC46A3Q7Z3Q1 461 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 RIBC1Q8N443 379 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 TMEM99Q8N816 258 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 TESCQ96BS2 214 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 C3orf49Q96BT1 292 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 AURKBQ96GD4 344 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 ZNF385AQ96PM9 386 aaKnown RBP11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 ZNF317Q96PQ6 595 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 SLC38A2Q96QD8 506 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 VRK1Q99986 396 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 KCNS3Q9BQ31 491 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 KATNB1Q9BVA0 655 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 DPY30Q9C005 99 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 PLK3Q9H4B4 646 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 AKTIPQ9H8T0 292 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 CA10Q9NS85 328 aa11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 MARCOQ9UEW3 520 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 FBXO9Q9UK97 447 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC3-201ENST00000373159 CFAP73A6NFT4 308 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 OR6C65A6NJZ3 312 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 AQP7P3A6NL99 342 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 AKR7A3O95154 331 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 VAMP5O95183 116 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 GPIP06744 558 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 OR4A8P0C604 315 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 CHI3L1P36222 383 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms