RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 SPDEFO95238 335 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 MT-ND4LP03901 98 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 ZNF14P17017 642 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-203ENST00000372232 NFYBP25208 207 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 RBMS1P29558 406 aaKnown RBP8.18□□□□□ -1.1
ATG4A-203ENST00000372232 AKT1P31749 480 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 NSG1P42857 185 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 SRP9P49458 86 aaKnown RBP8.18□□□□□ -1.1
ATG4A-203ENST00000372232 HCCSP53701 268 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 CDC42P60953 191 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 GAGE1Q13065 139 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 GAB1Q13480 694 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 ABRAXAS2Q15018 415 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 ZSWIM7Q19AV6 140 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 ARHGAP40Q5TG30 622 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 OR52W1Q6IF63 320 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 CD200R1LQ6Q8B3 271 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 MSANTD1Q6ZTZ1 278 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 TPRG1Q6ZUI0 275 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 LAS2Q8IYD9 372 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 LRRC18Q8N456 261 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 HDDC3Q8N4P3 179 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 ZNF610Q8N9Z0 462 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 CCDC54Q8NEL0 328 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 OR5T3Q8NGG3 340 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 ACOT12Q8WYK0 555 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 TEAD3Q99594 435 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 PINK1Q9BXM7 581 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 OR51B6Q9H340 312 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 CACYBPQ9HB71 228 aaKnown RBP8.18□□□□□ -1.1
ATG4A-203ENST00000372232 CA10Q9NS85 328 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 TEX10Q9NXF1 929 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-203ENST00000372232 CCL26Q9Y258 94 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 GOLT1BQ9Y3E0 138 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 EEF1E1O43324 174 aaKnown RBP8.17□□□□□ -1.1
ATG4A-203ENST00000372232 FADS1O60427 444 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 SOD1P00441 154 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 TIMP1P01033 207 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 CD2P06729 351 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 HOXB5P09067 269 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 LINC00271P0C7V0 271 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 ZNF35P13682 527 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 HOXA5P20719 270 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 HTR2AP28223 471 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 LTBRP36941 435 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 CCR2P41597 374 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 GDF5P43026 501 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 RPS25P62851 125 aaKnown RBP8.17□□□□□ -1.1
ATG4A-203ENST00000372232 SIM1P81133 766 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-203ENST00000372232 PRR5P85299 388 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 ABHD18Q0P651 414 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 HNF4GQ14541 408 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 RFTN2Q52LD8 501 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-203ENST00000372232 C22orf39Q6P5X5 142 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 LRRC28Q86X40 367 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-203ENST00000372232 CFAP206Q8IYR0 622 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 C10orf111Q8N326 155 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 FAM46DQ8NEK8 389 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 OR5M3Q8NGP4 307 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 OR56A3Q8NH54 315 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 TMEM203Q969S6 136 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 EGFL8Q99944 293 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 C20orf85Q9H1P6 137 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 BCO1Q9HAY6 547 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 SPACA1Q9HBV2 294 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 LHX9Q9NQ69 397 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 PRDM7Q9NQW5 492 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 ACSS1Q9NUB1 689 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-203ENST00000372232 CCL27Q9Y4X3 112 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 GABRR3A8MPY1 467 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 PRR23D1E9PI22 279 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-203ENST00000372232 MID1O15344 667 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 OR4E1P0C645 316 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 PRR23D2P0DMB1 279 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-203ENST00000372232 C6P13671 934 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 RPA2P15927 270 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 MGMTP16455 207 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 PITPNBP48739 271 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 ANXA11P50995 505 aaKnown RBP8.17□□□□□ -1.1
ATG4A-203ENST00000372232 CLDN8P56748 225 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 LSM6P62312 80 aaKnown RBP8.17□□□□□ -1.1
ATG4A-203ENST00000372232 PTGR1Q14914 329 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 USF2Q15853 346 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-203ENST00000372232 TTLL9Q3SXZ7 439 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 RNASE10Q5GAN6 216 aaKnown RBP8.17□□□□□ -1.1
ATG4A-203ENST00000372232 SSX6Q7RTT6 188 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 TMEM25Q86YD3 366 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 SIAH3Q8IW03 269 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 GPR135Q8IZ08 494 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 TOMM5Q8N4H5 51 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 TRAM1L1Q8N609 369 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 SLC5A8Q8N695 610 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 SPPL3Q8TCT6 385 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 UBTD2Q8WUN7 234 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 SLC25A28Q96A46 364 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 PNPLA2Q96AD5 504 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 MED8Q96G25 268 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 C7orf34Q96L11 122 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 ZNF385AQ96PM9 386 aaKnown RBP8.17□□□□□ -1.1
ATG4A-203ENST00000372232 COPS8Q99627 209 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms