RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 EPHA4P54764 986 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 RBPJQ06330 500 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 MFSD13AQ14CX5 517 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 GPR19Q15760 415 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 DCXRQ7Z4W1 244 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 LAS2Q8IYD9 372 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR5H6Q8NGV6 325 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR5W2Q8NH69 310 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 MSLNLQ96KJ4 702 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 ZNF300Q96RE9 604 aaPredicted RBP12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 ALG8Q9BVK2 526 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 CLDN24A6NM45 220 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 ACPPP15309 386 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 GM2AP17900 193 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 GCAP28676 217 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 DTD1Q8TEA8 209 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 CHPT1Q8WUD6 406 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 ZBTB8AQ96BR9 441 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 TECTBQ96PL2 329 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 GPA33Q99795 319 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 SULT4A1Q9BR01 284 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 C2CD4DB7Z1M9 353 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 SPDEFO95238 335 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 SPP1P10451 314 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 GLULP15104 373 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 SLC5A2P31639 672 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 SFTPDP35247 375 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 PCGF3Q3KNV8 242 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 RPS26P11Q5JNZ5 115 aaPredicted RBP12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 PXDC1Q5TGL8 231 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 NRMQ8IXM6 262 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 PLPP6Q8IY26 295 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR51Q1Q8NH59 317 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR5B2Q96R09 309 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 SLC6A16Q9GZN6 736 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 ERVMER34-1Q9H9K5 563 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 ZFP57Q9NU63 452 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 ABCA3Q99758 1704 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 SLC22A5O76082 557 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 CSF1P09603 554 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 PAX6P26367 422 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR1D4P47884 311 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 FOXA1P55317 472 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 DCDP81605 110 aaKnown RBP12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 TMEM184AQ6ZMB5 413 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 SNAPC3Q92966 411 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 TBC1D20Q96BZ9 403 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 MYH10P35580 1976 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 LRP5LA4QPB2 252 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 UBL4AP11441 157 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 IRF2P14316 349 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 CD46P15529 392 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 HIST1H1TP22492 207 aaPredicted RBP12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 RRADP55042 308 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 KIAA1024LP59773 190 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 SLC18B1Q6NT16 456 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 LRFN4Q6PJG9 635 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR2T4Q8NH00 348 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 NT5DC2Q9H857 520 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 THSD1Q9NS62 852 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 A0A0A6YYJ9 748 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 H3BML4 177 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 SIGLEC6O43699 453 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 ALDOBP05062 364 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 PNMTP11086 282 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 ADPRHP54922 357 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 TAP2Q03519 686 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 RFLNAQ6ZTI6 216 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 RHOXF1Q8NHV9 184 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 IL37Q9NZH6 218 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 CTGFP29279 349 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 GABRA2P47869 451 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 TBCEQ15813 527 aaPredicted RBP12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 KCTD20Q7Z5Y7 419 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 ZER1Q7Z7L7 766 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 SLC35F2Q8IXU6 374 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 SIMC1Q8NDZ2 872 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 TWSG1Q9GZX9 223 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 NPAP1Q9NZP6 1156 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 MCTS1Q9ULC4 181 aaKnown RBP12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 GPR45Q9Y5Y3 372 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 BCORQ6W2J9 1755 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 CDC14CA4D256 554 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 ANTXRLA6NF34 631 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 POU3F2P20265 443 aaPredicted RBP12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 MAOAP21397 527 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 PRSS3P35030 304 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 SLC26A5P58743 744 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 RAB40BQ12829 278 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 POU4F3Q15319 338 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 PITX2Q99697 317 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 ACPTQ9BZG2 426 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 C6orf106Q9H6K1 298 aaPredicted RBP12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 MAN2C1Q9NTJ4 1040 aa12.42□□□□□ -0.42
RAPGEF1-201ENST00000372189 TRAV18A0A075B6X5 111 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 FHITP49789 147 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 PTPRRQ15256 657 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 KCNJ8Q15842 424 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 LEG1Q6P5S2 330 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 DPY19L4Q7Z388 723 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms