RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 CPNE5Q9HCH3 593 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 MRPL15Q9P015 296 aaKnown RBP10.78□□□□□ -0.68
PDE6C-201ENST00000371447 SATB2Q9UPW6 733 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 SLC6A5Q9Y345 797 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 A0A075B6Q4 140 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 IRGMA1A4Y4 181 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 CCDC182A6NF36 153 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 METTL12A8MUP2 240 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 SCDO00767 359 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 SRPX2O60687 465 aaPredicted RBP10.77□□□□□ -0.69
PDE6C-201ENST00000371447 LYPD3O95274 346 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 PTTG1O95997 202 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 DRD5P21918 477 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 CASP3P42574 277 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 GPR3P46089 330 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 RAB15P59190 212 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 VASNQ6EMK4 673 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 KANSL1Q7Z3B3 1105 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 OR2I1PQ8NGU4 316 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 BRIX1Q8TDN6 353 aaKnown RBP10.77□□□□□ -0.69
PDE6C-201ENST00000371447 GCDHQ92947 438 aaPredicted RBP10.77□□□□□ -0.69
PDE6C-201ENST00000371447 RNF32Q9H0A6 362 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 B3GAT2Q9NPZ5 323 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 ACOXLQ9NUZ1 547 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 PRRC2CQ9Y520 2896 aaKnown RBP10.77□□□□□ -0.69
PDE6C-201ENST00000371447 ACOD1A6NK06 481 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 SLC22A31A6NKX4 558 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 IFNGP01579 166 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 NME1P15531 152 aaKnown RBP10.77□□□□□ -0.69
PDE6C-201ENST00000371447 SKP1P63208 163 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 PON3Q15166 354 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 RAB43Q86YS6 212 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 SERPINA12Q8IW75 414 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 AP3S1Q92572 193 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 KISS1RQ969F8 398 aaPredicted RBP10.77□□□□□ -0.69
PDE6C-201ENST00000371447 SP140LQ9H930 580 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 NANSQ9NR45 359 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 CTSFQ9UBX1 484 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 IKZF2Q9UKS7 526 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 A3GALT2U3KPV4 340 aa10.77□□□□□ -0.69
PDE6C-201ENST00000371447 OR6C68A6NDL8 312 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 TFP02787 698 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 SNRPBP14678 240 aaKnown RBP10.76□□□□□ -0.69
PDE6C-201ENST00000371447 ELK1P19419 428 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 EDNRAP25101 427 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 GRK6P43250 576 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 HNRNPKP61978 463 aaKnown RBP eCLIP10.76□□□□□ -0.69
PDE6C-201ENST00000371447 ACSM3Q53FZ2 586 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 ZNF613Q6PF04 617 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 NR4A3Q92570 626 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 OR14A2Q96R54 314 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 ADGRL4Q9HBW9 690 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 SLC2A4RGQ9NR83 387 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 TRBV2A0A0J9YWF9 115 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 FAM240BA0A1B0GVZ2 78 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 ICOSLGO75144 302 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 ZNF217O75362 1048 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 NDUFB2O95178 105 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 ENDOUP21128 410 aaKnown RBP10.76□□□□□ -0.69
PDE6C-201ENST00000371447 RPS4Y1P22090 263 aaKnown RBP10.76□□□□□ -0.69
PDE6C-201ENST00000371447 SRP9P49458 86 aaKnown RBP10.76□□□□□ -0.69
PDE6C-201ENST00000371447 CTXN1P60606 82 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 FZD5Q13467 585 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 GRM7Q14831 915 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 SLC25A30Q5SVS4 291 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 LINC00299Q6ZSB3 139 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 TMPRSS11FQ6ZWK6 438 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 ZNF595Q8IYB9 648 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 ABHD4Q8TB40 342 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 HSD17B8Q92506 261 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 TMCO6Q96DC7 493 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 ATF6BQ99941 703 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 ZNF649Q9BS31 505 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 G6PC3Q9BUM1 346 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 ZMIZ1Q9ULJ6 1067 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 TRDV1A0A1B0GX56 115 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 POLR1CO15160 346 aaPredicted RBP10.76□□□□□ -0.69
PDE6C-201ENST00000371447 RGS9O75916 674 aaPredicted RBP10.76□□□□□ -0.69
PDE6C-201ENST00000371447 UTS2O95399 124 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 NSA2O95478 260 aaKnown RBP10.76□□□□□ -0.69
PDE6C-201ENST00000371447 IL12BP29460 328 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 PI4KAP42356 2102 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 DHPSP49366 369 aaPredicted RBP10.76□□□□□ -0.69
PDE6C-201ENST00000371447 ZNF85Q03923 595 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 ZNF550Q7Z398 422 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 RNF113BQ8IZP6 322 aaKnown RBP10.76□□□□□ -0.69
PDE6C-201ENST00000371447 RDH10Q8IZV5 341 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 MINDY2Q8NBR6 621 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 IL17RDQ8NFM7 739 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 OR6C4Q8NGE1 309 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 OR1L3Q8NH93 324 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 ZNF671Q8TAW3 534 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 PTPMT1Q8WUK0 201 aaPredicted RBP10.76□□□□□ -0.69
PDE6C-201ENST00000371447 KTI12Q96EK9 354 aaPredicted RBP10.76□□□□□ -0.69
PDE6C-201ENST00000371447 ZDHHC12Q96GR4 267 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 TMEM5Q9Y2B1 443 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 CLDN16Q9Y5I7 305 aa10.76□□□□□ -0.69
PDE6C-201ENST00000371447 FAM221BA6H8Z2 402 aa10.75□□□□□ -0.69
PDE6C-201ENST00000371447 EEF1E1O43324 174 aaKnown RBP10.75□□□□□ -0.69
PDE6C-201ENST00000371447 ZNF749O43361 778 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms