RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 PARVBQ9HBI1 364 aa3.55□□□□□ -1.84
MCF2-203ENST00000370576 FBXO6Q9NRD1 293 aaPredicted RBP3.55□□□□□ -1.84
MCF2-203ENST00000370576 JKAMPQ9P055 326 aa3.55□□□□□ -1.84
MCF2-203ENST00000370576 SERTAD3Q9UJW9 196 aa3.55□□□□□ -1.84
MCF2-203ENST00000370576 ZNF490Q9ULM2 529 aaPredicted RBP3.55□□□□□ -1.84
MCF2-203ENST00000370576 IGKV1-8A0A0C4DH67 115 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 ZAR1LA6NP61 321 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 NPIPA2E9PIF3 369 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 TOR1AO14656 332 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 ADAM10O14672 748 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 NKX2-8O15522 239 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 OR1F1O43749 312 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 OR1I1O60431 355 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 PRAF2O60831 178 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 BCAS1O75363 584 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 OXSR1O95747 527 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 IGF2P01344 180 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 IGHV4-34P06331 123 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 PRSS56P0CW18 603 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 ZNF43P17038 809 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 ZNF7P17097 686 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 HRH2P25021 359 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 CRYBA2P53672 197 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 PCBP4P57723 403 aaKnown RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 NHLH1Q02575 133 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 TLE3Q04726 772 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 DBPQ10586 325 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 BNIP3Q12983 259 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 MAPK11Q15759 364 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 UTF1Q5T230 341 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 LETMD1Q6P1Q0 360 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 FAM151BQ6UXP7 276 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 GCNT7Q6ZNI0 430 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 PIM3Q86V86 326 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 KIF2BQ8N4N8 673 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 PACRGLQ8N7B6 248 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 SYT14Q8NB59 555 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 SIDT2Q8NBJ9 832 aaKnown RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 BHLHE22Q8NFJ8 381 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 OR2Y1Q8NGV0 311 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 OR5K2Q8NHB8 316 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 HM13Q8TCT9 377 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 GRHL3Q8TE85 626 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 NSMCE1Q8WV22 266 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 EEF1AKMT1Q8WVE0 214 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 FGF14Q92915 247 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 FBXO17Q96EF6 278 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 HOPXQ9BPY8 73 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 FSD1LQ9BXM9 530 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 MAP1LC3CQ9BXW4 147 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 OR2B2Q9GZK3 357 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 MTHFD2LQ9H903 347 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 SGK2Q9HBY8 427 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 DIABLOQ9NR28 239 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 NDE1Q9NXR1 346 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 USE1Q9NZ43 259 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 RHCGQ9UBD6 479 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 NUDT5Q9UKK9 219 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 CES1P1Q9UKY3 287 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 MMP17Q9ULZ9 603 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 PSG11Q9UQ72 335 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 YLPM1P49750 1951 aaKnown RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 MEGF11A6BM72 1044 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 FAM220BPB1ANY3 271 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 CCRL2O00421 344 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 SIGLEC5O15389 551 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 SERPINB7O75635 380 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 BCL10O95999 233 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 IGHG3P01860 377 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 MBPP02686 304 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 CYBBP04839 570 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 CHRNGP07510 517 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 PNMTP11086 282 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 COX4I1P13073 169 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 XRCC1P18887 633 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 RPS4Y1P22090 263 aaKnown RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 IMPA1P29218 277 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 PEBP1P30086 187 aaKnown RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 SLC8A1P32418 973 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 CHI3L1P36222 383 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 STK19P49842 368 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 DNA2P51530 1060 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 C21orf59P57076 290 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 AP3S2P59780 193 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 RHOAP61586 193 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 NAAAQ02083 359 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 ITPRIPL2Q3MIP1 535 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 PYCR3Q53H96 274 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 C5orf47Q569G3 176 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 ACSBG2Q5FVE4 666 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 C6orf163Q5TEZ5 329 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 TMEM200BQ69YZ2 307 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 TIPARPQ7Z3E1 657 aaKnown RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 SYT9Q86SS6 491 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 IGFN1Q86VF2 1251 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 PARGQ86W56 976 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 DCP2Q8IU60 420 aaKnown RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 UBE2J2Q8N2K1 259 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 GPR137Q96N19 417 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 ZFAND3Q9H8U3 227 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms