RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 ELOCQ15369 112 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 FAM26EQ8N5C1 309 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 WDSUB1Q8N9V3 476 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 OR5D14Q8NGL3 314 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 C3orf49Q96BT1 292 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 TRMT2BQ96GJ1 504 aaKnown RBP14.82□□□□□ -0.04
COL17A1-202ENST00000369733 GLIPR2Q9H4G4 154 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 ACKR4Q9NPB9 350 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 INIPQ9NRY2 104 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 A6NIZ1 184 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 B4GALT3O60512 393 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 SLC16A7O60669 478 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 CLDN20P56880 219 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 ERVFC1P60507 584 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 RAP1BP61224 184 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 RAP1AP62834 184 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 TLE3Q04726 772 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 PRDX1Q06830 199 aaKnown RBP14.81□□□□□ -0.04
COL17A1-202ENST00000369733 Q499Y3 187 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 ZNF542PQ5EBM4 170 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 HEPHL1Q6MZM0 1159 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 ST8SIA4Q92187 359 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 DOK1Q99704 481 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 MN1Q10571 1320 aaPredicted RBP14.81□□□□□ -0.04
COL17A1-202ENST00000369733 VASPP50552 380 aaPredicted RBP14.81□□□□□ -0.04
COL17A1-202ENST00000369733 EMP3P54852 163 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 LDLRAD1Q5T700 205 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.81□□□□□ -0.04
COL17A1-202ENST00000369733 UEVLDQ8IX04 471 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 DEFB119Q8N690 84 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 OR5K2Q8NHB8 316 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 LINC01599Q8WXQ3 324 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 AMDHD1Q96NU7 426 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 SORCS2Q96PQ0 1159 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 MS4A8Q9BY19 250 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 MCCC2Q9HCC0 563 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 PLEKHJ1Q9NW61 149 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 REV1Q9UBZ9 1251 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 NPFFR2Q9Y5X5 522 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 RPS10-NUDT3A0A1W2PQS6 291 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 TMEM72A0PK05 275 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 SLC22A23A1A5C7 686 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 CD1EP15812 388 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 ANXA7P20073 488 aaKnown RBP14.81□□□□□ -0.04
COL17A1-202ENST00000369733 RPS10P46783 165 aaKnown RBP14.81□□□□□ -0.04
COL17A1-202ENST00000369733 NDUFAF7Q7L592 441 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 ZNF695Q8IW36 515 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 SRRQ9GZT4 340 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 CHST8Q9H2A9 424 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 FANCFQ9NPI8 374 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 TP53I11O14683 189 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 CCSMST1Q4G0I0 132 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 PRSS36Q5K4E3 855 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 OR7E24Q6IFN5 339 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 C12orf76Q8N812 135 aaPredicted RBP14.81□□□□□ -0.04
COL17A1-202ENST00000369733 C11orf49Q9H6J7 331 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 COL22A1Q8NFW1 1626 aaPredicted RBP14.81□□□□□ -0.04
COL17A1-202ENST00000369733 ALS2Q96Q42 1657 aa14.81□□□□□ -0.04
COL17A1-202ENST00000369733 TSTD3H0UI37 97 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 STMND1H3BQB6 276 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 ETV6P41212 452 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 UBXN2BQ14CS0 331 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 GLCCI1Q86VQ1 547 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 ZNF761Q86XN6 746 aaPredicted RBP14.8□□□□□ -0.04
COL17A1-202ENST00000369733 SLAMF9Q96A28 289 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 KATNB1Q9BVA0 655 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 UBQLN3Q9H347 655 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 LUZP4Q9P127 313 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 MRPS17Q9Y2R5 130 aaKnown RBP14.8□□□□□ -0.04
COL17A1-202ENST00000369733 PPT1P50897 306 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 SULF2Q8IWU5 870 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 PRR22Q8IZ63 422 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 SPIN2AQ99865 258 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 SPIN2BQ9BPZ2 258 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 ALG12Q9BV10 488 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 ANKRD19PQ9H560 264 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 STARD5Q9NSY2 213 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 FAM86C1Q9NVL1 165 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 ETV7Q9Y603 341 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 PIGBOS1A0A0B4J2F0 54 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 A0A1W2PS29 197 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 TMEM212A6NML5 194 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 ADAM12O43184 909 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 PRKRAO75569 313 aaKnown RBP14.8□□□□□ -0.04
COL17A1-202ENST00000369733 PAPLNO95428 1278 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 NUDT1P36639 197 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 DAP3P51398 398 aaKnown RBP14.8□□□□□ -0.04
COL17A1-202ENST00000369733 AKR1C2P52895 323 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 PHF19Q5T6S3 580 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 FAM219BQ5XKK7 198 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 STEAP1BQ6NZ63 245 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 LILRB2Q8N423 598 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 DHRS9Q9BPW9 319 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 TSPAN10Q9H1Z9 355 aaPredicted RBP14.8□□□□□ -0.04
COL17A1-202ENST00000369733 SMCO3A2RU48 225 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 SCO1O75880 301 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 SLCO2B1O94956 709 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 F13BP05160 661 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 SLC6A11P48066 632 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 RNF141Q8WVD5 230 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms