RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 OR51A4Q8NGJ6 313 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 C16orf78Q8WTQ4 265 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 OR5P2Q8WZ92 322 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 MS4A4EQ96PG1 132 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 CHRNA10Q9GZZ6 450 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 VAX2Q9UIW0 290 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 AKR7A2O43488 359 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 GABRB1P18505 474 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 PRDX5P30044 214 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 DCTP40126 519 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 THNSL2Q86YJ6 484 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 CPA6Q8N4T0 437 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 PARPBPQ9NWS1 579 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 FOXJ3Q9UPW0 622 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 PPP6CO00743 305 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF280AP59817 542 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 RPS14P62263 151 aaKnown RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 CANT1Q8WVQ1 401 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 SLC12A9Q9BXP2 914 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 KCNIP1Q9NZI2 227 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 GLI2P10070 1586 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 A0A087WV62 115 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 GRK6P43250 576 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF92Q03936 586 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 EIF2B1Q14232 305 aaKnown RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 LRTOMTQ8WZ04 291 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 RERGQ96A58 199 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ACO2Q99798 780 aaKnown RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ABHD16BQ9H3Z7 469 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 GPR42O15529 346 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 SIAH2O43255 324 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TBX18O95935 607 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TFP02787 698 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF26P17031 533 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 DHODHQ02127 395 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 PLGLB1Q02325 96 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 DCST2Q5T1A1 773 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 OGFOD3Q6PK18 319 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 IGSF8Q969P0 613 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM9BQ9NQ34 198 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 PIN4Q9Y237 131 aaKnown RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM250H0YL14 139 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 CNMDO75829 334 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 PTPRAP18433 802 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 CRATP43155 626 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 PREPP48147 710 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 SH3BP2P78314 561 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 SLC35G1Q2M3R5 365 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 LINC01545Q5VT33 79 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 CLIP3Q96DZ5 547 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 MANBALQ9NQG1 85 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 POLR1DQ9Y2S0 133 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF780BQ9Y6R6 833 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 EEF1DP3Q658K8 133 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 EMG1Q92979 244 aaKnown RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 CPEB1Q9BZB8 566 aaKnown RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 MMP26Q9NRE1 261 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 SMIM35A0A1B0GVV1 85 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 NPIPB13A6NJU9 1138 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 NPIPB4C9JG80 1138 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 RTCAO00442 366 aaKnown RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ECI2O75521 394 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 CRKLP46109 303 aaKnown RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TAF1CQ15572 869 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 SEMA3CQ99985 751 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 CREG1O75629 220 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 GJA5P36382 358 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 MORN3Q6PF18 240 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TSSK4Q6SA08 328 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM145Q8NBT3 493 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 BCORL1Q5H9F3 1711 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TCRBV16S1A1N1A0A5B0 115 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 SLC22A20A6NK97 555 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ADH4P08319 380 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 SFTPCP11686 197 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 NOVA1P51513 510 aaKnown RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF41P51814 821 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 FAHD1Q6P587 224 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 SIGLECL1Q8N7X8 197 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 OR14L1PQ8NHC6 308 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 SCGB1C1Q8TD33 95 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 MRPS18AQ9NVS2 196 aaKnown RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF490Q9ULM2 529 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 A4GNTQ9UNA3 340 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 CYP8B1Q9UNU6 501 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 PCDHB14Q9Y5E9 798 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM88BA6NKF7 163 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 K7EPK0 472 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 APBA3O96018 575 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 MMP3P08254 477 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF43P17038 809 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ADIRFQ15847 76 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 CLEC14AQ86T13 490 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 MYLIPQ8WY64 445 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 MRGPRX4Q96LA9 322 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ANKRD20A5PA0PJZ0 165 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 HNRNPA2B1P22626 353 aaKnown RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ARL2P36404 184 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 DAOAP59103 153 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 AGO3Q9H9G7 860 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms