RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 PTTG3PQ9NZH4 202 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 TBC1D3DA0A087WVF3 549 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 TBC1D3IA0A087WXS9 549 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 GXYLT2A0PJZ3 443 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 TBC1D3LB9A6J9 549 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 AGR2O95994 175 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 CSN2P05814 226 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 TBC1D3HP0C7X1 549 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 IL9P15248 144 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 NDUFS1P28331 727 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 RPS27P42677 84 aaKnown RBP7.55□□□□□ -1.2
CD46-208ENST00000367042 SHC2P98077 582 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 ATXN7L3Q14CW9 347 aaPredicted RBP7.55□□□□□ -1.2
CD46-208ENST00000367042 PCGF3Q3KNV8 242 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 UBE2NLQ5JXB2 153 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 YOD1Q5VVQ6 348 aaPredicted RBP7.55□□□□□ -1.2
CD46-208ENST00000367042 TBC1D3CQ6IPX1 549 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 TMED4Q7Z7H5 227 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 TBC1D3Q8IZP1 549 aaPredicted RBP7.55□□□□□ -1.2
CD46-208ENST00000367042 SLAIN1Q8ND83 568 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 TMIEQ8NEW7 156 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 ST8SIA4Q92187 359 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 KISS1RQ969F8 398 aaPredicted RBP7.55□□□□□ -1.2
CD46-208ENST00000367042 PRSS27Q9BQR3 290 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 IL21RQ9HBE5 538 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 CD93Q9NPY3 652 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 NRIP3Q9NQ35 241 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 STARD5Q9NSY2 213 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 ZNF346Q9UL40 294 aaKnown RBP7.55□□□□□ -1.2
CD46-208ENST00000367042 SIGLEC7Q9Y286 467 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 INSL6Q9Y581 213 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 SPACA6W5XKT8 324 aa7.55□□□□□ -1.2
CD46-208ENST00000367042 RPS10-NUDT3A0A1W2PQS6 291 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 OR6C74A6NCV1 312 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 GOSR2O14653 212 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 CISD3P0C7P0 127 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 ZNF136P52737 540 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 ERVK-21P61565 698 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 ERVK-25P63136 954 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 CDK5R1Q15078 307 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 FAM220AQ7Z4H9 259 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 OR11G2Q8NGC1 345 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 OR5T3Q8NGG3 340 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 SMIM19Q96E16 107 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 SYNDIG1Q9H7V2 258 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 SRA1Q9HD15 236 aaKnown RBP7.54□□□□□ -1.2
CD46-208ENST00000367042 PRDM9Q9NQV7 894 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 INPP5EQ9NRR6 644 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 SERGEFQ9UGK8 458 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 POMT2Q9UKY4 750 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 MDC1Q14676 2089 aaKnown RBP7.54□□□□□ -1.2
CD46-208ENST00000367042 DENND4CQ5VZ89 1909 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 LOC100509620A0A075B734 347 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 A0A1B0GWA3 101 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 NFATC1O95644 943 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 ECDO95905 644 aaPredicted RBP7.54□□□□□ -1.2
CD46-208ENST00000367042 OR8G3PP0DMU2 310 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 CPMP14384 443 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 NID1P14543 1247 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 GALP22466 123 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 AKR1D1P51857 326 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 ACTA2P62736 377 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 SNRPNP63162 240 aaKnown RBP7.54□□□□□ -1.2
CD46-208ENST00000367042 ACTG2P63267 376 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 KLF9Q13886 244 aaPredicted RBP7.54□□□□□ -1.2
CD46-208ENST00000367042 FGL2Q14314 439 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 MFSD13AQ14CX5 517 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 TUSC1Q2TAM9 212 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 HACD4Q5VWC8 232 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 PRAMEF8Q5VWM4 474 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 PRAMEF7Q5VXH5 474 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 DMKNQ6E0U4 476 aaPredicted RBP7.54□□□□□ -1.2
CD46-208ENST00000367042 ARHGAP11AQ6P4F7 1023 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 SLC51BQ86UW2 128 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 IQCF2Q8IXL9 164 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 ZNF511Q8NB15 262 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 OR6M1Q8NGM8 313 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 OR5M1Q8NGP8 315 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 OR2L8Q8NGY9 312 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 RASD2Q96D21 266 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 GIMAP5Q96F15 307 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 TSSK2Q96PF2 358 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 TIMP4Q99727 224 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 RAB11FIP5Q9BXF6 653 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 PITHD1Q9GZP4 211 aaPredicted RBP7.54□□□□□ -1.2
CD46-208ENST00000367042 MEPEQ9NQ76 525 aaPredicted RBP7.54□□□□□ -1.2
CD46-208ENST00000367042 LYARQ9NX58 379 aaKnown RBP7.54□□□□□ -1.2
CD46-208ENST00000367042 MED11Q9P086 117 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 CES1P1Q9UKY3 287 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 CHD7Q9P2D1 2997 aa7.54□□□□□ -1.2
CD46-208ENST00000367042 CARNS1A5YM72 827 aa7.53□□□□□ -1.2
CD46-208ENST00000367042 KHNYNO15037 678 aaKnown RBP7.53□□□□□ -1.2
CD46-208ENST00000367042 PRKNO60260 465 aaPredicted RBP7.53□□□□□ -1.2
CD46-208ENST00000367042 ITGA10O75578 1167 aa7.53□□□□□ -1.2
CD46-208ENST00000367042 GNRH1P01148 92 aa7.53□□□□□ -1.2
CD46-208ENST00000367042 HLA-DQA2P01906 255 aa7.53□□□□□ -1.2
CD46-208ENST00000367042 ZNF35P13682 527 aa7.53□□□□□ -1.2
CD46-208ENST00000367042 PVRP15151 417 aa7.53□□□□□ -1.2
CD46-208ENST00000367042 CDK2P24941 298 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms