RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 TMEM200AQ86VY9 491 aa5□□□□□ -1.61
CDC42BPA-204ENST00000366767 GRHL3Q8TE85 626 aa5□□□□□ -1.61
CDC42BPA-204ENST00000366767 CNTNAP3Q9BZ76 1288 aa5□□□□□ -1.61
CDC42BPA-204ENST00000366767 OR52D1Q9H346 318 aa5□□□□□ -1.61
CDC42BPA-204ENST00000366767 DICER1Q9UPY3 1922 aaKnown RBP5□□□□□ -1.61
CDC42BPA-204ENST00000366767 A0A0J9YY10 115 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 A0A1B0GVT2 93 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 PIP5K1CO60331 668 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 FADS1O60427 444 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 HPGDSO60760 199 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 MT-ND4P03905 459 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 GNRHRP30968 328 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 MC3RP41968 323 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 GPR4P46093 362 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 PXNP49023 591 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 RPE65Q16518 533 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 MAPK14Q16539 360 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 DUSP7Q16829 419 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 LRIT3Q3SXY7 679 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 C12orf73Q69YU5 71 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 CD300LDQ6UXZ3 194 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 HIST2H3AQ71DI3 136 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 THEM6Q8WUY1 208 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 C14orf79Q96F83 325 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 MAP6Q96JE9 813 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 SORBS1Q9BX66 1292 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 ZNF768Q9H5H4 540 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 SLC35A3Q9Y2D2 325 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 ARHGEF17Q96PE2 2063 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 A0A1W2PPK0 400 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 LALBAP00709 142 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 PNMTP11086 282 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 BSGP35613 385 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 SOX3P41225 446 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 FRKP42685 505 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 CTBSQ01459 385 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 KIAA0141Q14154 515 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 TMEM201Q5SNT2 666 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 PLBD1Q6P4A8 553 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 Q6ZPB1 254 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 BEND4Q6ZU67 534 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 SLC29A4Q7RTT9 530 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 PLPP5Q8NEB5 264 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 SLIRPQ9GZT3 109 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 A0A087WZY1 265 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 CPED1A4D0V7 1026 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 GABRPO00591 440 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 CSTAP01040 98 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 RBMS1P29558 406 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 VIPR2P41587 438 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 MASP1P48740 699 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 ELOCQ15369 112 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 ARHGAP11BQ3KRB8 267 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 PDSS1Q5T2R2 415 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 BPHLQ86WA6 291 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 VN1R2Q8NFZ6 395 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 OR10Z1Q8NGY1 313 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 SPPL3Q8TCT6 385 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 SLC25A46Q96AG3 418 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 SPACA7Q96KW9 195 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 CCDC74BQ96LY2 380 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 STACQ99469 402 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 PAPOLGQ9BWT3 736 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 YY2O15391 372 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 TGOLN2O43493 480 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 GPR75O95800 540 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 AMY2AP04746 511 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 CPN1P15169 458 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 TGM1P22735 817 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 MRPS21P82921 87 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 IRF4Q15306 451 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 ODF4Q2M2E3 257 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 PCGF3Q3KNV8 242 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 KCTD18Q6PI47 426 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 OR9A2Q8NGT5 310 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 FBLIM1Q8WUP2 373 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 OR5M11Q96RB7 305 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 TTTY10Q9BZA0 68 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 TBX21Q9UL17 535 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 CTDSP2O14595 271 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 TFPIP10646 304 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 MMP11P24347 488 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 RAP2BP61225 183 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 RSU1Q15404 277 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 AANATQ16613 207 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 VRK2Q86Y07 508 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 C7orf61Q8IZ16 206 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 CSNK1A1LQ8N752 337 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 ZFP41Q8N8Y5 198 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 BMFQ96LC9 184 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 CNN2Q99439 309 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 OR52A5Q9H2C5 316 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 METTL17Q9H7H0 456 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 SDHAF3Q9NRP4 125 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 NDRG3Q9UGV2 375 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 CCL26Q9Y258 94 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 ZNF236Q9UL36 1845 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 A0A0U1RQK1 487 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 SLC43A1O75387 559 aa4.99□□□□□ -1.61
CDC42BPA-204ENST00000366767 DFFBO76075 338 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms