RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 SMYD3Q9H7B4 428 aa2.46□□□□□ -2.02
RNU4-28P-201ENST00000364739 SUDS3Q9H7L9 328 aaPredicted RBP2.46□□□□□ -2.02
RNU4-28P-201ENST00000364739 DMAP1Q9NPF5 467 aaPredicted RBP2.46□□□□□ -2.02
RNU4-28P-201ENST00000364739 CCL28Q9NRJ3 127 aa2.46□□□□□ -2.02
RNU4-28P-201ENST00000364739 AIPL1Q9NZN9 384 aa2.46□□□□□ -2.02
RNU4-28P-201ENST00000364739 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
RNU4-28P-201ENST00000364739 TMEM150BA6NC51 233 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 SS18L1O75177 396 aaPredicted RBP2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 SPAG7O75391 227 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 TM7SF2O76062 418 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 TRIM16O95361 564 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 IGFBP3P17936 291 aaPredicted RBP2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 TBPP20226 339 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 PSMA2P25787 234 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 FMO3P31513 532 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 PTGDSP41222 190 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 FAM83EQ2M2I3 478 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 FRMPD2BQ6IN97 320 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 FAM71E1Q6IPT2 247 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 KCNIP4Q6PIL6 250 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 GRAMD2AQ8IUY3 354 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 CNNM3Q8NE01 707 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 OR10G3Q8NGC4 313 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 OR4K14Q8NGD5 310 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 OR4D9Q8NGE8 314 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 FCRL1Q96LA6 429 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 SLC35A5Q9BS91 424 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 ROGDIQ9GZN7 287 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 POLR1EQ9GZS1 481 aaKnown RBP2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 CLMPQ9H6B4 373 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 RNF167Q9H6Y7 350 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 WDR76Q9H967 626 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 FOLH1BQ9HBA9 442 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 HOXC10Q9NYD6 342 aa2.45□□□□□ -2.02
RNU4-28P-201ENST00000364739 SH3TC1Q8TE82 1336 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 F8WDY8 70 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 AGPAT2O15120 278 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 OPN1MWP04001 364 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 ZNF286BP0CG31 522 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 PNMA6AP0CW24 399 aaPredicted RBP2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 OPN1MW2P0DN77 364 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 OPN1MW3P0DN78 364 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 TNNI3P19429 210 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 UQCRC2P22695 453 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 DLX1P56177 255 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 HSD17B7P56937 341 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 PJVKQ0ZLH3 352 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 PDZK1IP1Q13113 114 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 ZSCAN25Q6NSZ9 544 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 ZNF620Q6ZNG0 422 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 GDPD3Q7L5L3 318 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 ZNF619Q8N2I2 560 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 ARL10Q8N8L6 244 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 CCDC47Q96A33 483 aaKnown RBP2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 C4orf36Q96KX1 117 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 TMEM117Q9H0C3 514 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 HEBP2Q9Y5Z4 205 aa2.44□□□□□ -2.02
RNU4-28P-201ENST00000364739 SERPINE3A8MV23 424 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 CXCL13O43927 109 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 LRATO95237 230 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 ARF4P18085 180 aaPredicted RBP2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 NPR2P20594 1047 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 NT5EP21589 574 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 CCND2P30279 289 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 KIR2DS4P43632 304 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 AP3M2P53677 418 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 SLC26A11Q86WA9 606 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 C12orf56Q8IXR9 622 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 TTC5Q8N0Z6 440 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 DTX3LQ8TDB6 740 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 MRPS31Q92665 395 aaKnown RBP2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 CMTM7Q96FZ5 175 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 PAGE5Q96GU1 130 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 ALG12Q9BV10 488 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 EDEM2Q9BV94 578 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 DPH5Q9H2P9 285 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 ZFP14Q9HCL3 533 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 LHX9Q9NQ69 397 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 SLC17A5Q9NRA2 495 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 AK6Q9Y3D8 172 aaKnown RBP2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 COL1A2P08123 1366 aa2.43□□□□□ -2.02
RNU4-28P-201ENST00000364739 GPR179Q6PRD1 2367 aa2.42□□□□□ -2.02
RNU4-28P-201ENST00000364739 NSG1A0A0A6YYJ2 146 aa2.42□□□□□ -2.02
RNU4-28P-201ENST00000364739 KIR2DL5BA0A0G2JN68 375 aa2.42□□□□□ -2.02
RNU4-28P-201ENST00000364739 KIR2DL5BA0A0G2JPC4 375 aa2.42□□□□□ -2.02
RNU4-28P-201ENST00000364739 GSAPA4D1B5 854 aa2.42□□□□□ -2.02
RNU4-28P-201ENST00000364739 HIP1O00291 1037 aa2.42□□□□□ -2.02
RNU4-28P-201ENST00000364739 ZSCAN12O43309 604 aa2.42□□□□□ -2.02
RNU4-28P-201ENST00000364739 PRPSAP2O60256 369 aa2.42□□□□□ -2.02
RNU4-28P-201ENST00000364739 LGALS2P05162 132 aa2.42□□□□□ -2.02
RNU4-28P-201ENST00000364739 TDGF1P13385 188 aa2.42□□□□□ -2.02
RNU4-28P-201ENST00000364739 CALCRP30988 508 aa2.42□□□□□ -2.02
RNU4-28P-201ENST00000364739 YWHABP31946 246 aaKnown RBP2.42□□□□□ -2.02
RNU4-28P-201ENST00000364739 TFPI2P48307 235 aa2.42□□□□□ -2.02
RNU4-28P-201ENST00000364739 TDGF1P3P51864 188 aa2.42□□□□□ -2.02
RNU4-28P-201ENST00000364739 GRB7Q14451 532 aa2.42□□□□□ -2.02
RNU4-28P-201ENST00000364739 ATP6AP1Q15904 470 aa2.42□□□□□ -2.02
RNU4-28P-201ENST00000364739 SLC25A52Q3SY17 297 aa2.42□□□□□ -2.02
RNU4-28P-201ENST00000364739 OR2G6Q5TZ20 316 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms