RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 CDH10Q9Y6N8 788 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 GON4LQ3T8J9 2241 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 A0A1W2PQ09 198 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 SLC2A10O95528 541 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 APBB3O95704 486 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 ATP1B1P05026 303 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 CSF3P09919 207 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 UGT2B7P16662 529 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 FXYD6P3P58550 94 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 MC2RQ01718 297 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 ASAH1Q13510 395 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 MAPK14Q16539 360 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 TRMT12Q53H54 448 aaKnown RBP6.72□□□□□ -1.33
CLCN3-202ENST00000360642 GDPD1Q8N9F7 314 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 BBS1Q8NFJ9 593 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 OR2T33Q8NG76 320 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 OR52N1Q8NH53 320 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 TSACCQ96A04 125 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-202ENST00000360642 DCLRE1CQ96SD1 692 aaKnown RBP6.72□□□□□ -1.33
CLCN3-202ENST00000360642 GPHA2Q96T91 129 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 TEX12Q9BXU0 123 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 DPH1Q9BZG8 443 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 TMEM168Q9H0V1 697 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 SLC25A32Q9H2D1 315 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 LYRM4Q9HD34 91 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 SATB2Q9UPW6 733 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 CA5BQ9Y2D0 317 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 GSTK1Q9Y2Q3 226 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 LOC105369274A0A096LPK9 316 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 LOC102723532A0A0G2JNH3 316 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 EPOPA6NHQ4 379 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 HTR2AP28223 471 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 MAP3K8P41279 467 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 EIPR1Q53HC9 387 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 DDI2Q5TDH0 399 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 ZNF544Q6NX49 715 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 FIGLAQ6QHK4 219 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 FAM131AQ6UXB0 335 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 WDR88Q6ZMY6 472 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 OR4N4Q8N0Y3 316 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 ZNF619Q8N2I2 560 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 AP3S1Q92572 193 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 ARSGQ96EG1 525 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 TIMP4Q99727 224 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 UBQLN3Q9H347 655 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 RERGLQ9H628 205 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 HINT3Q9NQE9 182 aaKnown RBP6.71□□□□□ -1.33
CLCN3-202ENST00000360642 KCNE5Q9UJ90 142 aa6.71□□□□□ -1.33
CLCN3-202ENST00000360642 SCN3AQ9NY46 2000 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 FABP12A6NFH5 140 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 URADA6NGE7 173 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 BHLHE40O14503 412 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 POLR1CO15160 346 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-202ENST00000360642 HMGN1P05114 100 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 PRG2P13727 222 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 HOXB2P14652 356 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 RAC2P15153 192 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 TBXA2RP21731 343 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 GALP22466 123 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 TLX1P31314 330 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-202ENST00000360642 ACTR1BP42025 376 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 ACTR1AP61163 376 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 SRSF3P84103 164 aaKnown RBP6.71□□□□□ -1.34
CLCN3-202ENST00000360642 SCN1BQ07699 218 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 EOGTQ5NDL2 527 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 CCNJQ5T5M9 372 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 SLC23A3Q6PIS1 610 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 ZNF322Q6U7Q0 402 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-202ENST00000360642 RD3Q7Z3Z2 195 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 RNF113BQ8IZP6 322 aaKnown RBP6.71□□□□□ -1.34
CLCN3-202ENST00000360642 SIRT6Q8N6T7 355 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 ZFP41Q8N8Y5 198 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 ZCCHC10Q8TBK6 192 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 DNAJA4Q8WW22 397 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-202ENST00000360642 RSC1A1Q92681 617 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 DIRAS2Q96HU8 199 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 SAMD8Q96LT4 415 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 MOV10Q9HCE1 1003 aaKnown RBP6.71□□□□□ -1.34
CLCN3-202ENST00000360642 CD93Q9NPY3 652 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 DUSP22Q9NRW4 184 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 IL20RAQ9UHF4 553 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 MRPS2Q9Y399 296 aaKnown RBP6.71□□□□□ -1.34
CLCN3-202ENST00000360642 CSNK1G3Q9Y6M4 447 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 TICRRQ7Z2Z1 1910 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 SMIM30A4D0T7 59 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 TRAPPC13A5PLN9 417 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 A8MU76 341 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 CYR61O00622 381 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 SOCS6O14544 535 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 CHST10O43529 356 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 AKAP8O43823 692 aaKnown RBP6.71□□□□□ -1.34
CLCN3-202ENST00000360642 PLOD3O60568 738 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 STX11O75558 287 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 CCNKO75909 580 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 EGFP01133 1207 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 DBIP07108 87 aaKnown RBP6.71□□□□□ -1.34
CLCN3-202ENST00000360642 IFI6P09912 130 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 AZGP1P25311 298 aaKnown RBP6.71□□□□□ -1.34
CLCN3-202ENST00000360642 HOXD12P35452 270 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 BDH1Q02338 343 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms