RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 GXYLT1Q4G148 440 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 ZNF585AQ6P3V2 769 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 OR10D3Q8NH80 312 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 MIB2Q96AX9 1013 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 KTI12Q96EK9 354 aaPredicted RBP13.7□□□□□ -0.22
TPM1-206ENST00000358278 POTEKPQ9BYX7 375 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 SLC19A3Q9BZV2 496 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 COQ10BQ9H8M1 238 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 TIGARQ9NQ88 270 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 DNAJB9Q9UBS3 223 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 TMCC3Q9ULS5 477 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 LYVE1Q9Y5Y7 322 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 INTS1Q8N201 2190 aaKnown RBP13.69□□□□□ -0.22
TPM1-206ENST00000358278 TRBV4-1A0A0J9YWV2 114 aa13.69□□□□□ -0.22
TPM1-206ENST00000358278 CLOCKO15516 846 aa13.69□□□□□ -0.22
TPM1-206ENST00000358278 NPIPB7O75200 414 aa13.69□□□□□ -0.22
TPM1-206ENST00000358278 E2F6O75461 281 aa13.69□□□□□ -0.22
TPM1-206ENST00000358278 LDLRP01130 860 aa13.69□□□□□ -0.22
TPM1-206ENST00000358278 GTF2E2P29084 291 aaKnown RBP13.69□□□□□ -0.22
TPM1-206ENST00000358278 CARD18P57730 90 aa13.69□□□□□ -0.22
TPM1-206ENST00000358278 C1QL3Q5VWW1 255 aa13.69□□□□□ -0.22
TPM1-206ENST00000358278 PODNL1Q6PEZ8 512 aa13.69□□□□□ -0.22
TPM1-206ENST00000358278 TMPPEQ6ZT21 453 aa13.69□□□□□ -0.22
TPM1-206ENST00000358278 C10orf53Q8N6V4 93 aa13.69□□□□□ -0.22
TPM1-206ENST00000358278 ADGRG7Q96K78 797 aa13.69□□□□□ -0.22
TPM1-206ENST00000358278 ALPK1Q96QP1 1244 aa13.69□□□□□ -0.22
TPM1-206ENST00000358278 TAPBPLQ9BX59 468 aa13.69□□□□□ -0.22
TPM1-206ENST00000358278 PAQR5Q9NXK6 330 aaPredicted RBP13.69□□□□□ -0.22
TPM1-206ENST00000358278 MYO18BQ8IUG5 2567 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 A0A087WUU8 490 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 OR2T1O43869 369 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 CXCL13O43927 109 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 PIP5K1CO60331 668 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 WDR1O75083 606 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 PMS2P2O95744 297 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 GABRA1P14867 456 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 CASP6P55212 293 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 OR2B6P58173 313 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 PPP1R8Q12972 351 aaKnown RBP13.68□□□□□ -0.22
TPM1-206ENST00000358278 SF3B4Q15427 424 aaKnown RBP eCLIP13.68□□□□□ -0.221e-9■■□□□ 12.9
TPM1-206ENST00000358278 OR7A5Q15622 319 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 EXOC3L2Q2M3D2 409 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 FAM69AQ5T7M9 428 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 TBPL2Q6SJ96 375 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 ATCAYQ86WG3 371 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 NRMQ8IXM6 262 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 PFN4Q8NHR9 129 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 OSTF1Q92882 214 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 CPNE4Q96A23 557 aaPredicted RBP13.68□□□□□ -0.22
TPM1-206ENST00000358278 SLC25A36Q96CQ1 311 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 ZNF845Q96IR2 970 aaPredicted RBP13.68□□□□□ -0.22
TPM1-206ENST00000358278 TUBA1CQ9BQE3 449 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 S100A14Q9HCY8 104 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 KRCC1Q9NPI7 259 aaPredicted RBP13.68□□□□□ -0.22
TPM1-206ENST00000358278 VNN3Q9NY84 501 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 C6orf203Q9P0P8 240 aaPredicted RBP13.68□□□□□ -0.22
TPM1-206ENST00000358278 SH3BGRL2Q9UJC5 107 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 TRAPPC4Q9Y296 219 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 ZNF835Q9Y2P0 537 aa13.68□□□□□ -0.22
TPM1-206ENST00000358278 ENO4A6NNW6 628 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 AHRRA9YTQ3 701 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 H3BNX3 289 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 IMPDH2P12268 514 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 MRPL49Q13405 166 aaKnown RBP13.67□□□□□ -0.22
TPM1-206ENST00000358278 ATP6AP1Q15904 470 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 EMC4Q5J8M3 183 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 Q6ZPB1 254 aaPredicted RBP13.67□□□□□ -0.22
TPM1-206ENST00000358278 MBOAT2Q6ZWT7 520 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 RNF113BQ8IZP6 322 aaKnown RBP13.67□□□□□ -0.22
TPM1-206ENST00000358278 GALNT11Q8NCW6 608 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 ZPLD1Q8TCW7 415 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 LRTOMTQ8WZ04 291 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 TAAR8Q969N4 342 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 ZHX1-C8orf76Q96EF9 292 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 BDH2Q9BUT1 245 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 PTDSS2Q9BVG9 487 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 SRXN1Q9BYN0 137 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 TP63Q9H3D4 680 aaPredicted RBP13.67□□□□□ -0.22
TPM1-206ENST00000358278 MEPEQ9NQ76 525 aaPredicted RBP13.67□□□□□ -0.22
TPM1-206ENST00000358278 TINAGQ9UJW2 476 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 MCTS1Q9ULC4 181 aaKnown RBP13.67□□□□□ -0.22
TPM1-206ENST00000358278 SH3PXD2BA1X283 911 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 LIPT2A6NK58 231 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 CLCA1A8K7I4 914 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 OR10H3O60404 316 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 SYNGR4O95473 234 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 IFI30P13284 250 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 FPR1P21462 350 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 ACVR2AP27037 513 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 HMGA2P52926 109 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 RAC3P60763 192 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 SLC35A1P78382 337 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 ELF3P78545 371 aaPredicted RBP13.67□□□□□ -0.22
TPM1-206ENST00000358278 GK3PQ14409 553 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 PON3Q15166 354 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 SEC23BQ15437 767 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 IGFBP7Q16270 282 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 CDK20Q8IZL9 346 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 OR4K5Q8NGD3 323 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 MFSD8Q8NHS3 518 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms