RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 AASSQ9UDR5 926 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 SIGLEC7Q9Y286 467 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 TPRKBQ9Y3C4 175 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 ACACAQ13085 2346 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 MED12Q93074 2177 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 TRAV27A0A087WT01 109 aa16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 OR5H15A6NDH6 313 aa16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 M0R129 80 aa16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 CDK2AP1O14519 115 aa16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 OR7A10O76100 309 aa16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 APOBEC1P41238 236 aaKnown RBP16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 ID4P47928 161 aa16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 NR1H2P55055 460 aa16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 EFNB1P98172 346 aa16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 FOXO1Q12778 655 aa16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 ZNF74Q16587 644 aa16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 OR5M1Q8NGP8 315 aa16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 PTDSS2Q9BVG9 487 aa16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 POLDIP3Q9BY77 421 aaKnown RBP16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 OR11A1Q9GZK7 315 aa16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 RNF32Q9H0A6 362 aa16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 DUSP21Q9H596 190 aa16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 SCN3BQ9NY72 215 aa16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 DMXL2Q8TDJ6 3036 aa16.41■□□□□ 0.22
SMARCD3-202ENST00000356800 SH3D21A4FU49 640 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 A8MVM7 634 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 XPNPEP2O43895 674 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 ZIC3O60481 467 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 CEACAM4O75871 244 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 RCBTB2O95199 551 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 RFPL3SP0C7P2 107 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 EEF1B2P24534 225 aaKnown RBP16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 DPP4P27487 766 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 PCYT1AP49585 367 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 SMN1Q16637 294 aaKnown RBP16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 SLC25A30Q5SVS4 291 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 ACSM5Q6NUN0 579 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 OAFQ86UD1 273 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 SPACA3Q8IXA5 215 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 SLC43A2Q8N370 569 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 OR2M7Q8NG81 312 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 OR51A7Q8NH64 312 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 FANK1Q8TC84 345 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 HAS2Q92819 552 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 SAMD8Q96LT4 415 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 TNFRSF13CQ96RJ3 184 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 TSSK6Q9BXA6 273 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 PRRG3Q9BZD7 231 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 OR52D1Q9H346 318 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 MCCC2Q9HCC0 563 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 TBC1D23Q9NUY8 699 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 CHRNA9Q9UGM1 479 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 IL20RAQ9UHF4 553 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 A0A087WZY1 265 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 HCN1O60741 890 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 CBR3O75828 277 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 BGLAPP02818 100 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 EIF2S3P41091 472 aaKnown RBP16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 RPS5P46782 204 aaKnown RBP16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 DSCR4P56555 118 aaPredicted RBP16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 SLC35A2P78381 396 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 TMEM44Q2T9K0 475 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 CLEC12AQ5QGZ9 265 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 TMEM201Q5SNT2 666 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 THSD4Q6ZMP0 1018 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 OR2T33Q8NG76 320 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 OR4Q3Q8NH05 313 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 STK35Q8TDR2 534 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 LIPHQ8WWY8 451 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 RELTQ969Z4 430 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 DNAJA3Q96EY1 480 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 UBL7Q96S82 380 aaPredicted RBP16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 FAM173AQ9BQD7 235 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 TEX12Q9BXU0 123 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 PAK1IP1Q9NWT1 392 aaPredicted RBP16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 TVP23BQ9NYZ1 205 aa16.4■□□□□ 0.22
SMARCD3-202ENST00000356800 TRAV36DV7A0A075B6V5 113 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 FAM47E-STBD1D6RA91 191 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 MRPS14O60783 128 aaKnown RBP16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 SP1P08047 785 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 HK1P19367 917 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 SLC9A3P48764 834 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 ZBED5Q49AG3 693 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 GXYLT1Q4G148 440 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 C1orf140Q5VVS0 124 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 SMARCD3Q6STE5 483 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 IGFL2Q6UWQ7 119 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 SULF2Q8IWU5 870 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 GTPBP8Q8N3Z3 284 aaPredicted RBP16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 FAM26EQ8N5C1 309 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 IPCEF1Q8WWN9 437 aaPredicted RBP16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 ZBTB8AQ96BR9 441 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 FAM122AQ96E09 287 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 Q96MT0 163 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 SLC38A2Q96QD8 506 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 UBQLN3Q9H347 655 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 CCDC86Q9H6F5 360 aaKnown RBP16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 ZFP64Q9NPA5 681 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 CCNB1IP1Q9NPC3 277 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 KLHL1Q9NR64 748 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms