RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 NLRC3Q7RTR2 1065 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 NLRP8Q86W28 1048 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 OR6M1Q8NGM8 313 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 AMDHD1Q96NU7 426 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 POLDIP3Q9BY77 421 aaKnown RBP13.07□□□□□ -0.32
SREBF1-202ENST00000355815 WSB2Q9NYS7 404 aaPredicted RBP13.07□□□□□ -0.32
SREBF1-202ENST00000355815 LAMA2P24043 3122 aaKnown RBP13.07□□□□□ -0.32
SREBF1-202ENST00000355815 A0A0B4J2A0 478 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 ZC3H12DA2A288 527 aaKnown RBP13.07□□□□□ -0.32
SREBF1-202ENST00000355815 HYKKA2RU49 373 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 SLC1A3P43003 542 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 CAMLGP49069 296 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 RAP2BP61225 183 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 RAB40BQ12829 278 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 UBXN2BQ14CS0 331 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 GXYLT1Q4G148 440 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 PDZD11Q5EBL8 140 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 GPR155Q7Z3F1 870 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 P4HA3Q7Z4N8 544 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 SLC41A3Q96GZ6 507 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 WDR92Q96MX6 357 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 DCLRE1CQ96SD1 692 aaKnown RBP13.07□□□□□ -0.32
SREBF1-202ENST00000355815 NKX2-4Q9H2Z4 354 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 DZANK1Q9NVP4 752 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 SHPKQ9UHJ6 478 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 ANXA7P20073 488 aaKnown RBP13.06□□□□□ -0.32
SREBF1-202ENST00000355815 FRKP42685 505 aaPredicted RBP13.06□□□□□ -0.32
SREBF1-202ENST00000355815 ABHD13Q7L211 337 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 OR2AJ1Q8NGZ0 328 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 PDXPQ96GD0 296 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 MRGPRX3Q96LB0 322 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 C20orf24Q9BUV8 137 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 KCNE3Q9Y6H6 103 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 SVILO95425 2214 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 IGLV3-16A0A075B6K0 115 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 A0A1W2PR48 441 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 PRSS44E7EML9 344 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 RDH16O75452 317 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 ADH1BP00325 375 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 OR8U9P0C7N5 309 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 ATP5A1P25705 553 aaKnown RBP13.06□□□□□ -0.32
SREBF1-202ENST00000355815 CXADRP78310 365 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 GBX1Q14549 363 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 NKAPLQ5M9Q1 402 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 NKAIN4Q8IVV8 208 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 FBXL6Q8N531 539 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 METTL21AQ8WXB1 218 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 SMPDL3BQ92485 455 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 DVL3Q92997 716 aaPredicted RBP13.06□□□□□ -0.32
SREBF1-202ENST00000355815 NECAB3Q96P71 396 aaPredicted RBP13.06□□□□□ -0.32
SREBF1-202ENST00000355815 SFXN1Q9H9B4 322 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 GREB1Q4ZG55 1949 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 A0A0A6YYJ9 748 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 A0A0B4J203 849 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 HMGN4O00479 90 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 SOCS6O14544 535 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 ELK1P19419 428 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 FUT1P19526 365 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 MAPK3P27361 379 aaPredicted RBP13.06□□□□□ -0.32
SREBF1-202ENST00000355815 S100A11P31949 105 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 ENTPD8Q5MY95 495 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 PARM1Q6UWI2 310 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 SSX9Q7RTT3 188 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 ADGRF3Q8IZF5 1079 aa13.06□□□□□ -0.32
SREBF1-202ENST00000355815 ELF4Q99607 663 aaPredicted RBP13.06□□□□□ -0.32
SREBF1-202ENST00000355815 TCEAL2Q9H3H9 227 aaPredicted RBP13.06□□□□□ -0.32
SREBF1-202ENST00000355815 A0A0A6YYC8 382 aaPredicted RBP13.05□□□□□ -0.32
SREBF1-202ENST00000355815 ANKRD61A6NGH8 418 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 I3L1I5 382 aaPredicted RBP13.05□□□□□ -0.32
SREBF1-202ENST00000355815 GREM1O60565 184 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 AHSA1O95433 338 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 LALBAP00709 142 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 PLGP00747 810 aaPredicted RBP13.05□□□□□ -0.32
SREBF1-202ENST00000355815 RAB3AP20336 220 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 CFL1P23528 166 aaKnown RBP13.05□□□□□ -0.32
SREBF1-202ENST00000355815 EPHA5P54756 1037 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 RPE65Q16518 533 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 SLC29A4Q7RTT9 530 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 ZER1Q7Z7L7 766 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 CLDN22Q8N7P3 220 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 LGALS14Q8TCE9 139 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 ASB16Q96NS5 453 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 SLC6A5Q9Y345 797 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 ASB4Q9Y574 426 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 HEBP2Q9Y5Z4 205 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 ADH6P28332 368 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 XCR1P46094 333 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 CAPZA1P52907 286 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 ASAH1Q13510 395 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 CSNK1A1LQ8N752 337 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 LSMEM1Q8N8F7 131 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 BRIX1Q8TDN6 353 aaKnown RBP13.05□□□□□ -0.32
SREBF1-202ENST00000355815 RSPRY1Q96DX4 576 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 PTCHD1Q96NR3 888 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 OR2A14Q96R47 310 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 LSM5Q9Y4Y9 91 aaKnown RBP13.05□□□□□ -0.32
SREBF1-202ENST00000355815 ETV5P41161 510 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 TMEM240Q5SV17 173 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 IRAK1BP1Q5VVH5 260 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 YOD1Q5VVQ6 348 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms