RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 COPS7AQ9UBW8 275 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 TESQ9UGI8 421 aaKnown RBP6.33□□□□□ -1.4
VPS13A-201ENST00000355766 BLOC1S6Q9UL45 172 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 POFUT2Q9Y2G5 429 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 ZNF835Q9Y2P0 537 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 WDR45Q9Y484 360 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 NCOA6Q14686 2063 aaPredicted RBP6.32□□□□□ -1.4
VPS13A-201ENST00000355766 A0A1W2PS29 197 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 CDHR4A6H8M9 788 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 FRG2CA6NGY1 282 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 VSTM2BA6NLU5 285 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 E9PQ18 207 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 NPIPB9F8W1W9 429 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 OR5F1O95221 314 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 HPP00738 406 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 C1QCP02747 245 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 MT-ND1P03886 318 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 H1F0P07305 194 aaKnown RBP6.32□□□□□ -1.4
VPS13A-201ENST00000355766 LYNP07948 512 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 ACP2P11117 423 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 GSTM3P21266 225 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 DRD5P21918 477 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 RRM2P31350 389 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 RYKP34925 604 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 PIGAP37287 484 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 PPICP45877 212 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 EMDP50402 254 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 PRKAG1P54619 331 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 NUP107P57740 925 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 GABARAPL2P60520 117 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 CXCR4P61073 352 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 ESRRGP62508 458 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 CSNK2BP67870 215 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 PSG6Q00889 435 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 OCA2Q04671 838 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 COX10Q12887 443 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 ZNF141Q15928 474 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 SYPL1Q16563 259 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 DUSP5Q16690 384 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 DUSP7Q16829 419 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 MICAQ29983 383 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 ZNF750Q32MQ0 723 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 TRMT12Q53H54 448 aaKnown RBP6.32□□□□□ -1.4
VPS13A-201ENST00000355766 ZNF311Q5JNZ3 666 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 FAM180BQ6P0A1 224 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 COX15Q7KZN9 410 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 CXXC5Q7LFL8 322 aaKnown RBP6.32□□□□□ -1.4
VPS13A-201ENST00000355766 TSEN54Q7Z6J9 526 aaKnown RBP6.32□□□□□ -1.4
VPS13A-201ENST00000355766 RANBP3LQ86VV4 465 aaPredicted RBP6.32□□□□□ -1.4
VPS13A-201ENST00000355766 PRIMA1Q86XR5 153 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 ZNF440Q8IYI8 595 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 GALNT4Q8N4A0 578 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 ZNF615Q8N8J6 731 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 OR52R1Q8NGF1 315 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 OR52P1PQ8NH57 321 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 MAGEE2Q8TD90 523 aaPredicted RBP6.32□□□□□ -1.4
VPS13A-201ENST00000355766 GIPC3Q8TF64 312 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 THAP3Q8WTV1 239 aaPredicted RBP6.32□□□□□ -1.4
VPS13A-201ENST00000355766 ZNF566Q969W8 418 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 SLC35A4Q96G79 324 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 APOL4Q9BPW4 351 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 FUZQ9BT04 418 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 DGCR6LQ9BY27 220 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 ZNF556Q9HAH1 456 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 FOLH1BQ9HBA9 442 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 EXOSC3Q9NQT5 275 aaKnown RBP6.32□□□□□ -1.4
VPS13A-201ENST00000355766 ACER3Q9NUN7 267 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 PLA2G3Q9NZ20 509 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 KIF17Q9P2E2 1029 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 C19orf25Q9UFG5 118 aaPredicted RBP6.32□□□□□ -1.4
VPS13A-201ENST00000355766 TMCC3Q9ULS5 477 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 MGAT4BQ9UQ53 548 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 ZNF443Q9Y2A4 671 aaPredicted RBP6.32□□□□□ -1.4
VPS13A-201ENST00000355766 SH3GLB1Q9Y371 365 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 SCN3AQ9NY46 2000 aa6.32□□□□□ -1.4
VPS13A-201ENST00000355766 STAB1Q9NY15 2570 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 C2orf92A0A1B0GVN3 265 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 TRIM64CA6NLI5 447 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 C17orf105B2RV13 164 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 FAM47E-STBD1D6RA91 191 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 FAM227AF5H4B4 570 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 hCG_2039718K7EN88 272 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 PDLIM1O00151 329 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 MPZL2O60487 215 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 DNAJB6O75190 326 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 WISP2O76076 250 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 CCNB2O95067 398 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 KCNK2O95069 426 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 GADD45GO95257 159 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 IGF2P01344 180 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 OPN1SWP03999 348 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 MAOAP21397 527 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 CBLP22681 906 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 SLC37A1P57057 533 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 RGS8P57771 180 aaPredicted RBP6.31□□□□□ -1.4
VPS13A-201ENST00000355766 EEF1A1P68104 462 aaKnown RBP6.31□□□□□ -1.4
VPS13A-201ENST00000355766 MAT1AQ00266 395 aaKnown RBP6.31□□□□□ -1.4
VPS13A-201ENST00000355766 PMP22Q01453 160 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 SPIBQ01892 262 aa6.31□□□□□ -1.4
VPS13A-201ENST00000355766 ALDH6A1Q02252 535 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms