RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 LIN7BQ9HAP6 207 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 ADRB1P08588 477 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 NAT1P18440 290 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 ENDOGQ14249 297 aaKnown RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 ZNF440Q8IYI8 595 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 OR5P2Q8WZ92 322 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 NUP214P35658 2090 aaPredicted RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 FEZF1A0PJY2 475 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 SLC15A5A6NIM6 579 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 SLC16A6O15403 523 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 TOX3O15405 576 aaPredicted RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 ADAM11O75078 769 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 PPOXP50336 477 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 C9orf152Q5JTZ5 239 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 OR2T2Q6IF00 324 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 TSPYL5Q86VY4 417 aaPredicted RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 MKXQ8IYA7 352 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 RNF175Q8N4F7 328 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 DUSP19Q8WTR2 217 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 GSTO2Q9H4Y5 243 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 EXOSC3Q9NQT5 275 aaKnown RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 LYRM2Q9NU23 88 aaPredicted RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 SLC6A14Q9UN76 642 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 A0A1B0GVG6 124 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 H3BQ06 376 aaPredicted RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 LAG3P18627 525 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 HSD17B7P56937 341 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 CATR1Q13166 79 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 C19orf47Q8N9M1 422 aaKnown RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 KCNJ15Q99712 375 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 CCM2LQ9NUG4 571 aaPredicted RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 FBXL12Q9NXK8 326 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 OSGIN1Q9UJX0 560 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 LOC102725191A0A1B0GVB3 256 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 GLB1P16278 677 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 S100A4P26447 101 aaKnown RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 TMEM201Q5SNT2 666 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 SLC35G3Q8N808 338 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 ARRDC3Q96B67 414 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 NTMT1Q9BV86 223 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 OR51I2Q9H344 312 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 SLC6A20Q9NP91 592 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 H3BML4 177 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 GPR39O43194 453 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 POP7O75817 140 aaKnown RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 PMP2P02689 132 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 HMGCLP35914 325 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 RPE65Q16518 533 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 TMEM88Q6PEY1 159 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 TSGA13Q96PP4 275 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 CABLES2Q9BTV7 478 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 MENTQ9BUN1 341 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 CSNK1G3Q9Y6M4 447 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 CHD5Q8TDI0 1954 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 EGFP01133 1207 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 RPL17P18621 184 aaKnown RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 DAP3P51398 398 aaKnown RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 WDR4P57081 412 aaKnown RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 BRAT1Q6PJG6 821 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 TMEM135Q86UB9 458 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 KLHDC8BQ8IXV7 354 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 OR8J3Q8NGG0 315 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 ZNF566Q969W8 418 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 ZNF599Q96NL3 588 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 TMEM175Q9BSA9 504 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 GSX1Q9H4S2 264 aaPredicted RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 KCNK13Q9HB14 408 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 SMIM35A0A1B0GVV1 85 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 CXorf49A8MYA2 514 aaPredicted RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 ANHXE9PGG2 379 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 SPI1P17947 270 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 OR4D2P58180 307 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 OR10A3P58181 314 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 PARP16Q8N5Y8 322 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 OR13D1Q8NGV5 346 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 DIO2Q92813 273 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 DAZLQ92904 295 aaKnown RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 DHRS4Q9BTZ2 278 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 HEYLQ9NQ87 328 aaPredicted RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 PGAP2Q9UHJ9 254 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 FAM189A1O60320 539 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 YIF1AO95070 293 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 OR5AL1P0C617 328 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 GPM6BQ13491 265 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 BCL7AQ4VC05 210 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 IGSF11Q5DX21 431 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 CPEB2Q7Z5Q1 589 aaKnown RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 PPP1R3BQ86XI6 285 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 OR4A4PQ8NGN8 299 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 GPR22Q99680 433 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 SLC12A9Q9BXP2 914 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 TOLLIPQ9H0E2 274 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 BCO1Q9HAY6 547 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 MYF6P23409 242 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 KIAA1024LP59773 190 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 LRRC25Q8N386 305 aaPredicted RBP7.54□□□□□ -1.2
SCN8A-201ENST00000354534 SLC2A13Q96QE2 648 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 PKMYT1Q99640 499 aa7.54□□□□□ -1.2
SCN8A-201ENST00000354534 IFT22Q9H7X7 185 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms