RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 FGF20Q9NP95 211 aaPredicted RBP7.49□□□□□ -1.21
CD44-205ENST00000352818 CTPS2Q9NRF8 586 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 TCFL5Q9UL49 500 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 SLC7A7Q9UM01 511 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 CFL2Q9Y281 166 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 LSM2Q9Y333 95 aaKnown RBP7.49□□□□□ -1.21
CD44-205ENST00000352818 MGAM2Q2M2H8 2515 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 KMT2CQ8NEZ4 4911 aaKnown RBP7.48□□□□□ -1.21
CD44-205ENST00000352818 A0A0B4J2E0 115 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 A0A1B0GX12 115 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 PEX12O00623 359 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 DSCR3O14972 297 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 PRODHO43272 600 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 CHP2O43745 196 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 PRKYO43930 277 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 PTHP01270 115 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 HMGN1P05114 100 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 CT45A8P0DMV1 189 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 CT45A9P0DMV2 189 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 FOLR1P15328 257 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 CD36P16671 472 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 ZNF182P17025 639 aaPredicted RBP7.48□□□□□ -1.21
CD44-205ENST00000352818 MST1P26927 711 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 GRK5P34947 590 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 ADH7P40394 386 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 ARL4DP49703 201 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 ATP12AP54707 1039 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 RRADP55042 308 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 CTBP2P56545 445 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 DCAF7P61962 342 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 TUBA1BP68363 451 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 PSPHP78330 225 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 BTG2P78543 158 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 MAT1AQ00266 395 aaKnown RBP7.48□□□□□ -1.21
CD44-205ENST00000352818 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.48□□□□□ -1.21
CD44-205ENST00000352818 RAB40BQ12829 278 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 ZNF169Q14929 603 aaPredicted RBP7.48□□□□□ -1.21
CD44-205ENST00000352818 C3AR1Q16581 482 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 MOGQ16653 247 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 TIMM50Q3ZCQ8 353 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 MINDY4Q4G0A6 757 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 CT45A2Q5DJT8 189 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 PDZK1Q5T2W1 519 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 ACSM5Q6NUN0 579 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 FIGNL1Q6PIW4 674 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 FAM198BQ6UWH4 519 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 GFRALQ6UXV0 394 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 TMPRSS11FQ6ZWK6 438 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 TUBA1AQ71U36 451 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 ZNF550Q7Z398 422 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 ZAR1Q86SH2 424 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 PPP1R3BQ86XI6 285 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 NRMQ8IXM6 262 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 CYP4Z2PQ8N1L4 340 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 IQCF1Q8N6M8 205 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 BCORP1Q8N888 145 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 TCEANCQ8N8B7 351 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 LSMEM1Q8N8F7 131 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 FAM71CQ8NEG0 241 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 OR1L3Q8NH93 324 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 C16orf52Q8NHV5 167 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 DYNC2LI1Q8TCX1 351 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 TMEM255BQ8WV15 326 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 TMEM239Q8WW34 195 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 VMP1Q96GC9 406 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 TMEM80Q96HE8 168 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 FAM46AQ96IP4 442 aaKnown RBP7.48□□□□□ -1.21
CD44-205ENST00000352818 ZNF582Q96NG8 517 aaPredicted RBP7.48□□□□□ -1.21
CD44-205ENST00000352818 SH3GL3Q99963 347 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 MND1Q9BWT6 205 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 JAM3Q9BX67 310 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 TSSK6Q9BXA6 273 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 PLA2G12AQ9BZM1 189 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 TRIM2Q9C040 744 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 HOXD1Q9GZZ0 328 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 OR10A5Q9H207 317 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 FN3KQ9H479 309 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 TMEM27Q9HBJ8 222 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 PALMDQ9NP74 551 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 TBC1D23Q9NUY8 699 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 FBXO34Q9NWN3 711 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 IRAK4Q9NWZ3 460 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 DNAJB12Q9NXW2 375 aaKnown RBP7.48□□□□□ -1.21
CD44-205ENST00000352818 TVP23BQ9NYZ1 205 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 DNAJC27Q9NZQ0 273 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 SELENONQ9NZV5 590 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 DIMT1Q9UNQ2 313 aaKnown RBP7.48□□□□□ -1.21
CD44-205ENST00000352818 SLC35A3Q9Y2D2 325 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 A3GALT2U3KPV4 340 aa7.48□□□□□ -1.21
CD44-205ENST00000352818 A0A1B0GX78 115 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 TCRBV16S1A1N1A0A5B0 115 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 HTR3EA5X5Y0 456 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 FRG2CA6NGY1 282 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 UNC119BA6NIH7 251 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 C17orf105B2RV13 164 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 SURF4O15260 269 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 DYRK3O43781 588 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 PIP5K1CO60331 668 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 MAN1A2O60476 641 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 RAB36O95755 333 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms