RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TRDV1A0A1B0GX56 115 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 SLC22A31A6NKX4 558 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 B4E171 279 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 MCIDASD6RGH6 385 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 LRRN3E7EW58 273 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF670-ZNF695F2Z2N8 137 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 WWP2O00308 870 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 IMPA2O14732 288 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 GNB5O14775 395 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 HCRTR2O43614 444 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 NDUFB5O43674 189 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 CDC40O60508 579 aaKnown RBP eCLIP6.3□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF354AO60765 605 aaPredicted RBP6.3□□□□□ -1.4
TRIM55-203ENST00000350034 NPIPB7O75200 414 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 DKK1O94907 266 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 LALBAP00709 142 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 IFNGP01579 166 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 BGLAPP02818 100 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 ASAH2BP0C7U1 165 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 BMP4P12644 408 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 HIST1H1CP16403 213 aaKnown RBP6.3□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF28P17035 718 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF3P17036 446 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 PGCP20142 388 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 GALP22466 123 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 PSMA1P25786 263 aaKnown RBP6.3□□□□□ -1.4
TRIM55-203ENST00000350034 TACR3P29371 465 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 NOS3P29474 1203 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 FGF9P31371 208 aaPredicted RBP6.3□□□□□ -1.4
TRIM55-203ENST00000350034 UQCRC1P31930 480 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 CCKBRP32239 447 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 EVI2BP34910 448 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 MPLP40238 635 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 TSPAN7P41732 249 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 GRK6P43250 576 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 P2RX1P51575 399 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 SLC26A5P58743 744 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 PRPS1P60891 318 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 RPS3AP61247 264 aaKnown RBP6.3□□□□□ -1.4
TRIM55-203ENST00000350034 GPR50Q13585 617 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 IL10RAQ13651 578 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 GGTLC2Q14390 218 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 TOMM34Q15785 309 aaPredicted RBP6.3□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.3□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF404Q494X3 552 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 PLA2G2CQ5R387 149 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 PHF19Q5T6S3 580 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 FAAH2Q6GMR7 532 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF322Q6U7Q0 402 aaPredicted RBP6.3□□□□□ -1.4
TRIM55-203ENST00000350034 FAM198BQ6UWH4 519 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 FAM122BQ7Z309 247 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 LHFPL3Q86UP9 236 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 ZBTB46Q86UZ6 589 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 MISPQ8IVT2 679 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 KLHL36Q8N4N3 616 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 ACBD7Q8N6N7 88 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 AMER2Q8N7J2 671 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 TMEM99Q8N816 258 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 NPEPL1Q8NDH3 523 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 OR5L2Q8NGL0 311 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 OR5M3Q8NGP4 307 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 OR9Q1Q8NGQ5 310 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 MOSPD2Q8NHP6 518 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 MCFD2Q8NI22 146 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 GPR119Q8TDV5 335 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 SPRYD4Q8WW59 207 aaPredicted RBP6.3□□□□□ -1.4
TRIM55-203ENST00000350034 METTL21AQ8WXB1 218 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 TTC9Q92623 222 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 RNF31Q96EP0 1072 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 ERMAPQ96PL5 475 aaPredicted RBP6.3□□□□□ -1.4
TRIM55-203ENST00000350034 SECISBP2Q96T21 854 aaKnown RBP6.3□□□□□ -1.4
TRIM55-203ENST00000350034 LPAR4Q99677 370 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 CTRCQ99895 268 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 MED18Q9BUE0 208 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 TBL1XR1Q9BZK7 514 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 WDR12Q9GZL7 423 aaKnown RBP6.3□□□□□ -1.4
TRIM55-203ENST00000350034 SYNDIG1Q9H7V2 258 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 MED20Q9H944 212 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 AKIRIN1Q9H9L7 192 aaPredicted RBP6.3□□□□□ -1.4
TRIM55-203ENST00000350034 ADGRL4Q9HBW9 690 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 MMP25Q9NPA2 562 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 ASB6Q9NWX5 421 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 SLC6A5Q9Y345 797 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 IER3IP1Q9Y5U9 82 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 NPFFR2Q9Y5X5 522 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 CABIN1Q9Y6J0 2220 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 FER1L5A0AVI2 2057 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 UNC13CQ8NB66 2214 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 IGLV3-32A0A0A0MS00 114 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 TRBV11-1A0A0K0K1C0 115 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.29□□□□□ -1.4
TRIM55-203ENST00000350034 A0A1W2PQ72 361 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 ZC3H12DA2A288 527 aaKnown RBP6.29□□□□□ -1.4
TRIM55-203ENST00000350034 C17orf51A8MQB3 221 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 C12orf71A8MTZ7 269 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 J3QRK9 145 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 ETV2O00321 342 aaPredicted RBP6.29□□□□□ -1.4
TRIM55-203ENST00000350034 PLD2O14939 933 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 AKAP8O43823 692 aaKnown RBP6.29□□□□□ -1.4
TRIM55-203ENST00000350034 FZD7O75084 574 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms