RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 ACMSDQ8TDX5 336 aa13.58□□□□□ -0.24
COPE-202ENST00000349893 BCL2L2Q92843 193 aaPredicted RBP13.58□□□□□ -0.24
COPE-202ENST00000349893 ANKRD27Q96NW4 1050 aa13.58□□□□□ -0.24
COPE-202ENST00000349893 SF3B5Q9BWJ5 86 aaKnown RBP13.58□□□□□ -0.24
COPE-202ENST00000349893 ZNF350Q9GZX5 532 aa13.58□□□□□ -0.24
COPE-202ENST00000349893 TSPYL1Q9H0U9 437 aa13.58□□□□□ -0.24
COPE-202ENST00000349893 SERHL2Q9H4I8 314 aa13.58□□□□□ -0.24
COPE-202ENST00000349893 TMEM45AQ9NWC5 275 aa13.58□□□□□ -0.24
COPE-202ENST00000349893 EMCNQ9ULC0 261 aa13.58□□□□□ -0.24
COPE-202ENST00000349893 PCDHGB4Q9UN71 923 aa13.58□□□□□ -0.24
COPE-202ENST00000349893 SLC35A3Q9Y2D2 325 aa13.58□□□□□ -0.24
COPE-202ENST00000349893 ZNF208O43345 1280 aa13.57□□□□□ -0.24
COPE-202ENST00000349893 BCAS1O75363 584 aaPredicted RBP13.57□□□□□ -0.24
COPE-202ENST00000349893 LAMP1P11279 417 aa13.57□□□□□ -0.24
COPE-202ENST00000349893 BCKDHAP12694 445 aa13.57□□□□□ -0.24
COPE-202ENST00000349893 RPL3P39023 403 aaKnown RBP13.57□□□□□ -0.24
COPE-202ENST00000349893 DNAJB13P59910 316 aa13.57□□□□□ -0.24
COPE-202ENST00000349893 PLAURQ03405 335 aa13.57□□□□□ -0.24
COPE-202ENST00000349893 GPR68Q15743 365 aa13.57□□□□□ -0.24
COPE-202ENST00000349893 MAPK14Q16539 360 aa13.57□□□□□ -0.24
COPE-202ENST00000349893 ARHGAP11BQ3KRB8 267 aa13.57□□□□□ -0.24
COPE-202ENST00000349893 CLEC6AQ6EIG7 209 aa13.57□□□□□ -0.24
COPE-202ENST00000349893 SHQ1Q6PI26 577 aaKnown RBP13.57□□□□□ -0.24
COPE-202ENST00000349893 NATD1Q8N6N6 113 aa13.57□□□□□ -0.24
COPE-202ENST00000349893 DNAJA3Q96EY1 480 aa13.57□□□□□ -0.24
COPE-202ENST00000349893 ZNF385AQ96PM9 386 aaKnown RBP13.57□□□□□ -0.24
COPE-202ENST00000349893 LRRC37BQ96QE4 947 aa13.57□□□□□ -0.24
COPE-202ENST00000349893 NAA11Q9BSU3 229 aaPredicted RBP13.57□□□□□ -0.24
COPE-202ENST00000349893 NELFAQ9H3P2 528 aa13.57□□□□□ -0.24
COPE-202ENST00000349893 TUBB1Q9H4B7 451 aa13.57□□□□□ -0.24
COPE-202ENST00000349893 SEC61A2Q9H9S3 476 aa13.57□□□□□ -0.24
COPE-202ENST00000349893 EXOSC3Q9NQT5 275 aaKnown RBP13.57□□□□□ -0.24
COPE-202ENST00000349893 PCDHGB1Q9Y5G3 927 aa13.57□□□□□ -0.24
COPE-202ENST00000349893 CMYA5Q8N3K9 4069 aa13.57□□□□□ -0.24
COPE-202ENST00000349893 A0A087WUV0 522 aaPredicted RBP13.56□□□□□ -0.24
COPE-202ENST00000349893 DUXAA6NLW8 204 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 VSTM5A8MXK1 200 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 LYNX1G3V0Z9 82 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 RGS9O75916 674 aaPredicted RBP13.56□□□□□ -0.24
COPE-202ENST00000349893 LYNX1P0DP58 116 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 HOXB1P14653 301 aaPredicted RBP13.56□□□□□ -0.24
COPE-202ENST00000349893 CDH2P19022 906 aaPredicted RBP13.56□□□□□ -0.24
COPE-202ENST00000349893 HPCAL1P37235 193 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 HTR3AP46098 478 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 MAP2K6P52564 334 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 IL1RL1Q01638 556 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 ELFN2Q5R3F8 820 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 LIPMQ5VYY2 423 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 AAED1Q7RTV5 226 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 SPATA21Q7Z572 469 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 CDK20Q8IZL9 346 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 OR9K2Q8NGE7 335 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 OR51F2Q8NH61 342 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 ZNF563Q8TA94 476 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 CKAP2Q8WWK9 683 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 PMM1Q92871 262 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 COQ8BQ96D53 544 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 MKLN1Q9UL63 735 aa13.56□□□□□ -0.24
COPE-202ENST00000349893 TRAV20A0A0B4J274 112 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 C6orf47O95873 294 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 LGI1O95970 557 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 PNPP00491 289 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 AVPP01185 164 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 GAAP10253 952 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 MYL2P10916 166 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 EVX1P49640 407 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 UBE2NP61088 152 aaKnown RBP13.55□□□□□ -0.24
COPE-202ENST00000349893 ETF1P62495 437 aaKnown RBP13.55□□□□□ -0.24
COPE-202ENST00000349893 LSM12Q3MHD2 195 aaKnown RBP13.55□□□□□ -0.24
COPE-202ENST00000349893 SPDYE7PQ495Y7 208 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 SLC9B1Q4ZJI4 515 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 TREML4Q6UXN2 200 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 MYPOPQ86VE0 399 aaPredicted RBP13.55□□□□□ -0.24
COPE-202ENST00000349893 ZDHHC22Q8N966 263 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 DDIT4LQ96D03 193 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 AURKBQ96GD4 344 aaPredicted RBP13.55□□□□□ -0.24
COPE-202ENST00000349893 SUCNR1Q9BXA5 334 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 DYNLRB1Q9NP97 96 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 ESM1Q9NQ30 184 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 G6PC2Q9NQR9 355 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 DCDC2Q9UHG0 476 aa13.55□□□□□ -0.24
COPE-202ENST00000349893 TMED7-TICAM2A0A0A6YYA0 188 aa13.54□□□□□ -0.24
COPE-202ENST00000349893 IGHV2OR16-5A0A0B4J2B6 119 aa13.54□□□□□ -0.24
COPE-202ENST00000349893 EXOC1LA0A1B0GW35 172 aa13.54□□□□□ -0.24
COPE-202ENST00000349893 ZNF587BE7ETH6 402 aa13.54□□□□□ -0.24
COPE-202ENST00000349893 NR5A2O00482 541 aa13.54□□□□□ -0.24
COPE-202ENST00000349893 AZIN1O14977 448 aa13.54□□□□□ -0.24
COPE-202ENST00000349893 ADRA2AP08913 450 aa13.54□□□□□ -0.24
COPE-202ENST00000349893 SAGP10523 405 aaPredicted RBP13.54□□□□□ -0.24
COPE-202ENST00000349893 ACHEP22303 614 aa13.54□□□□□ -0.24
COPE-202ENST00000349893 GPR6P46095 362 aaPredicted RBP13.54□□□□□ -0.24
COPE-202ENST00000349893 LMO4P61968 165 aa13.54□□□□□ -0.24
COPE-202ENST00000349893 RPS26P62854 115 aaKnown RBP13.54□□□□□ -0.24
COPE-202ENST00000349893 FOXL1Q12952 345 aa13.54□□□□□ -0.24
COPE-202ENST00000349893 TYW3Q6IPR3 259 aaKnown RBP13.54□□□□□ -0.24
COPE-202ENST00000349893 LINGO2Q7L985 606 aa13.54□□□□□ -0.24
COPE-202ENST00000349893 C1QL2Q7Z5L3 287 aa13.54□□□□□ -0.24
COPE-202ENST00000349893 CARM1Q86X55 608 aa13.54□□□□□ -0.24
COPE-202ENST00000349893 MIPOL1Q8TD10 442 aa13.54□□□□□ -0.24
COPE-202ENST00000349893 POLE3Q9NRF9 147 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms