RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 TMEM231Q9H6L2 316 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 ACKR4Q9NPB9 350 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 ASF1BQ9NVP2 202 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 GPN3Q9UHW5 284 aaPredicted RBP13.13□□□□□ -0.31
RLIM-202ENST00000349225 GOLGA4Q13439 2230 aaKnown RBP13.13□□□□□ -0.31
RLIM-202ENST00000349225 CENPVL1A0A0U1RR11 272 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 FEZF1A0PJY2 475 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 RNF222A6NCQ9 220 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 IDSB3KWA1 339 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 KCNAB3O43448 404 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 CSF2RBP32927 897 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 RORAP35398 523 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 TAS2R43P59537 309 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 PLEKHN1Q494U1 663 aaPredicted RBP13.12□□□□□ -0.31
RLIM-202ENST00000349225 GLB1LQ6UWU2 654 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 USP53Q70EK8 1073 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 MYLIPQ8WY64 445 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 PRSS27Q9BQR3 290 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 MFRPQ9BY79 579 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 MARCH5Q9NX47 278 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 ANKRD61A6NGH8 418 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 C5orf52A6NGY3 159 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 SYT5O00445 386 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 MAN2B1O00754 1011 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 PRG2P13727 222 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 TAS2R20P59543 309 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 SMAD3P84022 425 aaKnown RBP13.12□□□□□ -0.31
RLIM-202ENST00000349225 FOXK2Q01167 660 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 PDZK1IP1Q13113 114 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 MRM1Q6IN84 353 aaKnown RBP13.12□□□□□ -0.31
RLIM-202ENST00000349225 H3F3CQ6NXT2 135 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 ZNF433Q8N7K0 673 aaPredicted RBP13.12□□□□□ -0.31
RLIM-202ENST00000349225 OR4A4PQ8NGN8 299 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 C1orf216Q8TAB5 229 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 DUSP19Q8WTR2 217 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 PAWRQ96IZ0 340 aaKnown RBP13.12□□□□□ -0.31
RLIM-202ENST00000349225 CAMK1GQ96NX5 476 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 C1QTNF2Q9BXJ5 285 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 GAREM1Q9H706 876 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 SEBOXQ9HB31 216 aaPredicted RBP13.12□□□□□ -0.31
RLIM-202ENST00000349225 ZFP57Q9NU63 452 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 UBE2QL1A1L167 161 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 LRIT2A6NDA9 550 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 COLCA2A8K830 154 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 STX11O75558 287 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 PSMB10P40306 273 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 GMFBP60983 142 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 UQCC3Q6UW78 93 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 CMTM3Q96MX0 182 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 TEX12Q9BXU0 123 aa13.12□□□□□ -0.31
RLIM-202ENST00000349225 ZCCHC2Q9C0B9 1178 aaKnown RBP13.12□□□□□ -0.31
RLIM-202ENST00000349225 CARHSP1Q9Y2V2 147 aaKnown RBP13.12□□□□□ -0.31
RLIM-202ENST00000349225 DDNO94850 711 aaPredicted RBP13.11□□□□□ -0.31
RLIM-202ENST00000349225 GATMP50440 423 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 CRMP1Q14194 572 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 YOD1Q5VVQ6 348 aaPredicted RBP13.11□□□□□ -0.31
RLIM-202ENST00000349225 KCNRGQ8N5I3 272 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 TNFAIP8L1Q8WVP5 186 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 MCHR1Q99705 422 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 MS4A8Q9BY19 250 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 AICDAQ9GZX7 198 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 TMEM138Q9NPI0 162 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 INPP5EQ9NRR6 644 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 C2orf42Q9NWW7 574 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 KIAA1549LQ6ZVL6 1849 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 SELLP14151 372 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 MAPK8P45983 427 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 PRLHRP49683 370 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 GUCA2AQ02747 115 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 UNQ9370/PRO34162Q6UXP9 181 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 C12orf40Q86WS4 652 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 LNX2Q8N448 690 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 EID2Q8N6I1 236 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 OR51S1Q8NGJ8 323 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 RGP1Q92546 391 aaPredicted RBP13.11□□□□□ -0.31
RLIM-202ENST00000349225 ACSS1Q9NUB1 689 aaPredicted RBP13.11□□□□□ -0.31
RLIM-202ENST00000349225 SIDT1Q9NXL6 827 aaKnown RBP13.11□□□□□ -0.31
RLIM-202ENST00000349225 ZNF629Q9UEG4 869 aaPredicted RBP13.11□□□□□ -0.31
RLIM-202ENST00000349225 ZNF223Q9UK11 482 aaPredicted RBP13.11□□□□□ -0.31
RLIM-202ENST00000349225 SULT1B1O43704 296 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 ARL6IP5O75915 188 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 NR0B1P51843 470 aaKnown RBP13.11□□□□□ -0.31
RLIM-202ENST00000349225 NCBP2P52298 156 aaKnown RBP eCLIP13.11□□□□□ -0.31
RLIM-202ENST00000349225 BLOC1S1P78537 153 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 KRT33BQ14525 404 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 PCGF3Q3KNV8 242 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 C11orf88Q6PI97 169 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 TMEM220Q6QAJ8 160 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 BIVMQ86UB2 503 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 CD99L2Q8TCZ2 262 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 OR51M1Q9H341 326 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 CMC2Q9NRP2 79 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 GHRLQ9UBU3 117 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 TNFSF18Q9UNG2 199 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 HEATR5BQ9P2D3 2071 aa13.11□□□□□ -0.31
RLIM-202ENST00000349225 EML5Q05BV3 1969 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 RAB19A4D1S5 217 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 MEIS3P1A6NDR6 274 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 PAK4O96013 591 aaPredicted RBP13.1□□□□□ -0.31
RLIM-202ENST00000349225 KHKP50053 298 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms