RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 PTP4A1Q93096 173 aa12.76□□□□□ -0.37
TRIM4-201ENST00000349062 MAP6Q96JE9 813 aa12.76□□□□□ -0.37
TRIM4-201ENST00000349062 C4orf36Q96KX1 117 aa12.76□□□□□ -0.37
TRIM4-201ENST00000349062 VSTM2LQ96N03 204 aa12.76□□□□□ -0.37
TRIM4-201ENST00000349062 GSTK1Q9Y2Q3 226 aa12.76□□□□□ -0.37
TRIM4-201ENST00000349062 A0A087WV62 115 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 MRPS14O60783 128 aaKnown RBP12.75□□□□□ -0.37
TRIM4-201ENST00000349062 HIST1H1CP16403 213 aaKnown RBP12.75□□□□□ -0.37
TRIM4-201ENST00000349062 AQP2P41181 271 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 MLLT11Q13015 90 aaPredicted RBP12.75□□□□□ -0.37
TRIM4-201ENST00000349062 ASB18Q6ZVZ8 466 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 ACBD7Q8N6N7 88 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 OR6C4Q8NGE1 309 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 ZPLD1Q8TCW7 415 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 SMOC1Q9H4F8 434 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 RNF121Q9H920 327 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 MKKSQ9NPJ1 570 aaPredicted RBP12.75□□□□□ -0.37
TRIM4-201ENST00000349062 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.75□□□□□ -0.37
TRIM4-201ENST00000349062 TESQ9UGI8 421 aaKnown RBP12.75□□□□□ -0.37
TRIM4-201ENST00000349062 SIT1Q9Y3P8 196 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 SIRT4Q9Y6E7 314 aaPredicted RBP12.75□□□□□ -0.37
TRIM4-201ENST00000349062 BDP1A6H8Y1 2624 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 FAM221BA6H8Z2 402 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 ANKRD61A6NGH8 418 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 SCDO00767 359 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 NSA2O95478 260 aaKnown RBP12.75□□□□□ -0.37
TRIM4-201ENST00000349062 GPANK1O95872 356 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 THBS1P07996 1170 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 IL12BP29460 328 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 E2F1Q01094 437 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 CFHR1Q03591 330 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 FZD5Q13467 585 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 PRAMEF8Q5VWM4 474 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 PRAMEF7Q5VXH5 474 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 APOOLQ6UXV4 268 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 STACQ99469 402 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 WACQ9BTA9 647 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 PCNX3Q9H6A9 2034 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 GVINP1Q7Z2Y8 2422 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 TVP23AA6NH52 213 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 B4DXG7 233 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 CSF2RBP32927 897 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 KIR2DL3P43628 341 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 OR3A3P47888 321 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 NXPH1P58417 271 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 PHF19Q5T6S3 580 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 AADACL4Q5VUY2 407 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 C1QL3Q5VWW1 255 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 SIGIRRQ6IA17 410 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 ZNF595Q8IYB9 648 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 POGLUT1Q8NBL1 392 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 MOSPD2Q8NHP6 518 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 CTHRC1Q96CG8 243 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 CDX2Q99626 313 aaPredicted RBP12.75□□□□□ -0.37
TRIM4-201ENST00000349062 HDHD2Q9H0R4 259 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 ING1Q9UK53 422 aaPredicted RBP12.75□□□□□ -0.37
TRIM4-201ENST00000349062 SATB2Q9UPW6 733 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 SIGLEC7Q9Y286 467 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 PCDHGB2Q9Y5G2 931 aa12.75□□□□□ -0.37
TRIM4-201ENST00000349062 IGHV1OR21-1A0A087WYE8 117 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 A0A0X1KG70 313 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 SERINC4A6NH21 518 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 IDSB3KWA1 339 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 RAD1O60671 282 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 PIPP12273 146 aaPredicted RBP12.74□□□□□ -0.37
TRIM4-201ENST00000349062 ZNF3P17036 446 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 ENDOUP21128 410 aaKnown RBP12.74□□□□□ -0.37
TRIM4-201ENST00000349062 FBLP22087 321 aaKnown RBP12.74□□□□□ -0.37
TRIM4-201ENST00000349062 ACAA2P42765 397 aaKnown RBP12.74□□□□□ -0.37
TRIM4-201ENST00000349062 RPS5P46782 204 aaKnown RBP12.74□□□□□ -0.37
TRIM4-201ENST00000349062 FASLGP48023 281 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 AFF3P51826 1226 aaKnown RBP12.74□□□□□ -0.37
TRIM4-201ENST00000349062 ARFIP1P53367 373 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 ATP12AP54707 1039 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 TOMM34Q15785 309 aaPredicted RBP12.74□□□□□ -0.37
TRIM4-201ENST00000349062 TMEM201Q5SNT2 666 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.74□□□□□ -0.37
TRIM4-201ENST00000349062 CCDC28AQ8IWP9 274 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 OR8H3Q8N146 312 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 ZNF511Q8NB15 262 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 C8orf44Q96CB5 159 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 TEAD3Q99594 435 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 KATNB1Q9BVA0 655 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 GTPBP2Q9BX10 602 aaKnown RBP12.74□□□□□ -0.37
TRIM4-201ENST00000349062 MCUBQ9NWR8 336 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 GNG8Q9UK08 70 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 DUX1O43812 170 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 DOK2O60496 412 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 HCN1O60741 890 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 HPGDSO60760 199 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 CSF3P09919 207 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 SLC2A2P11168 524 aaPredicted RBP12.74□□□□□ -0.37
TRIM4-201ENST00000349062 PRKACBP22694 351 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 RTL4Q6ZR62 310 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 SSX6Q7RTT6 188 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 CEP76Q8TAP6 659 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 CCDC74AQ96AQ1 378 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 Q96M85 177 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 RTN4RQ9BZR6 473 aa12.74□□□□□ -0.37
TRIM4-201ENST00000349062 NDUFB11Q9NX14 153 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms