RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 STEAP2Q8NFT2 490 aa12.76□□□□□ -0.37
HMGN3-202ENST00000344726 C3orf49Q96BT1 292 aa12.76□□□□□ -0.37
HMGN3-202ENST00000344726 ZHX1-C8orf76Q96EF9 292 aa12.76□□□□□ -0.37
HMGN3-202ENST00000344726 SMR3AQ99954 134 aa12.76□□□□□ -0.37
HMGN3-202ENST00000344726 CPPED1Q9BRF8 314 aaPredicted RBP12.76□□□□□ -0.37
HMGN3-202ENST00000344726 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.76□□□□□ -0.37
HMGN3-202ENST00000344726 TMEM229AB2RXF0 380 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 C5orf58C9J3I9 102 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 TPST1O60507 370 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 LYZL6O75951 148 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 IGHV3-9P01782 118 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 ETS2P15036 469 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 IGHV1-2P23083 117 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 PPIBP23284 216 aaKnown RBP12.75□□□□□ -0.37
HMGN3-202ENST00000344726 IL32P24001 234 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 CXCR1P25024 350 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 MAP2K6P52564 334 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 NKX6-1P78426 367 aaPredicted RBP12.75□□□□□ -0.37
HMGN3-202ENST00000344726 CDK6Q00534 326 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 P2RY6Q15077 328 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 ZSWIM7Q19AV6 140 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 GLIPR1L2Q4G1C9 344 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 ALKBH2Q6NS38 261 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 CGB2Q6NT52 195 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 REEP3Q6NUK4 255 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 BHLHA15Q7RTS1 189 aaPredicted RBP12.75□□□□□ -0.37
HMGN3-202ENST00000344726 DPP10Q8N608 796 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 PIGXQ8TBF5 258 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 KISS1RQ969F8 398 aaPredicted RBP12.75□□□□□ -0.37
HMGN3-202ENST00000344726 PLPPR2Q96GM1 343 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 TMEM204Q9BSN7 226 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 HDHD5Q9BXW7 423 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 POTEKPQ9BYX7 375 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 RABEP2Q9H5N1 569 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 EMC3Q9P0I2 261 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 LEF1Q9UJU2 399 aaPredicted RBP12.75□□□□□ -0.37
HMGN3-202ENST00000344726 NOSIPQ9Y314 301 aaKnown RBP12.75□□□□□ -0.37
HMGN3-202ENST00000344726 ZANQ9Y493 2812 aa12.75□□□□□ -0.37
HMGN3-202ENST00000344726 LIPT2A6NK58 231 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 NPIPB7O75200 414 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 COX5AP20674 150 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 HTR2AP28223 471 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 ADSLP30566 484 aaPredicted RBP12.74□□□□□ -0.37
HMGN3-202ENST00000344726 PRKAR1BP31321 381 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 FOXG1P55316 489 aaPredicted RBP12.74□□□□□ -0.37
HMGN3-202ENST00000344726 COPZ1P61923 177 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 SLC35A1P78382 337 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 SF3A3Q12874 501 aaKnown RBP eCLIP12.74□□□□□ -0.37
HMGN3-202ENST00000344726 CEACAM7Q14002 265 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 SCARB2Q14108 478 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 OR7A5Q15622 319 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 ZNF704Q6ZNC4 412 aaPredicted RBP12.74□□□□□ -0.37
HMGN3-202ENST00000344726 DHDDSQ86SQ9 333 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 PTOV1Q86YD1 416 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 ZNF100Q8IYN0 542 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 TMEM99Q8N816 258 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 LILRB1Q8NHL6 650 aaPredicted RBP12.74□□□□□ -0.37
HMGN3-202ENST00000344726 CCL19Q99731 98 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 PIP5K1AQ99755 562 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 WFDC6Q9BQY6 131 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 SIKE1Q9BRV8 207 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 TMEM120AQ9BXJ8 343 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 TMEM38AQ9H6F2 299 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 FGFR1OP2Q9NVK5 253 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 PRDM4Q9UKN5 801 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 TRIM33Q9UPN9 1127 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 NDUFAF1Q9Y375 327 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 FLVCR1Q9Y5Y0 555 aa12.74□□□□□ -0.37
HMGN3-202ENST00000344726 NIPBLQ6KC79 2804 aaeCLIP12.74□□□□□ -0.37
HMGN3-202ENST00000344726 EVPLLA8MZ36 301 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 FBP2O00757 339 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 EIF1BO60739 113 aaKnown RBP12.73□□□□□ -0.37
HMGN3-202ENST00000344726 AKR7A3O95154 331 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 AQP1P29972 269 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 IDUAP35475 653 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 P2RY4P51582 365 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 MTPNP58546 118 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 EGR4Q05215 589 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 SLC17A1Q14916 467 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 Q5PR19 223 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 FBXW9Q5XUX1 488 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 DHRS4L2Q6PKH6 230 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 PAQR6Q6TCH4 344 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 LRRC75A-AS1Q8N1F1 130 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 CIARTQ8N365 385 aaPredicted RBP12.73□□□□□ -0.37
HMGN3-202ENST00000344726 ZNF433Q8N7K0 673 aaPredicted RBP12.73□□□□□ -0.37
HMGN3-202ENST00000344726 SLC35B4Q969S0 331 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 APH1AQ96BI3 265 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 ANKRD27Q96NW4 1050 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 CGREF1Q99674 301 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 PRR14Q9BWN1 585 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 ARMC7Q9H6L4 198 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 CACYBPQ9HB71 228 aaKnown RBP12.73□□□□□ -0.37
HMGN3-202ENST00000344726 CORO2BQ9UQ03 480 aa12.73□□□□□ -0.37
HMGN3-202ENST00000344726 AQP7P3A6NL99 342 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 A8MVM7 634 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 GPR171O14626 319 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 ANGPT2O15123 496 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 SMPD2O60906 423 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 CNOT4O95628 575 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms