RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 DUSP19Q8WTR2 217 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 NR4A3Q92570 626 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 TRIM63Q969Q1 353 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 CRELD1Q96HD1 420 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 POLR2J2Q9GZM3 115 aaKnown RBP13.38□□□□□ -0.27
CXCL12-201ENST00000343575 POLR2J3Q9H1A7 115 aaKnown RBP13.38□□□□□ -0.27
CXCL12-201ENST00000343575 ANKRD19PQ9H560 264 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 PROK2Q9HC23 129 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 KIF17Q9P2E2 1029 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 TRAPPC4Q9Y296 219 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 GTPBP1O00178 669 aaKnown RBP13.38□□□□□ -0.27
CXCL12-201ENST00000343575 FAAHO00519 579 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 HCRTR2O43614 444 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 EPHA2P29317 976 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 SSR4P51571 173 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 COPZ1P61923 177 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 TRAM2Q15035 370 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 INPP5JQ15735 1006 aaPredicted RBP13.38□□□□□ -0.27
CXCL12-201ENST00000343575 PGBD2Q6P3X8 592 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 CCBE1Q6UXH8 406 aaPredicted RBP13.38□□□□□ -0.27
CXCL12-201ENST00000343575 LINC00114Q6XXX2 140 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 ZER1Q7Z7L7 766 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 GALNT5Q7Z7M9 940 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 P3H2Q8IVL5 708 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 ZNF426Q9BUY5 554 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 C6orf62Q9GZU0 229 aaPredicted RBP13.38□□□□□ -0.27
CXCL12-201ENST00000343575 KRT84Q9NSB2 600 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 EIF4E2O60573 245 aaKnown RBP13.37□□□□□ -0.27
CXCL12-201ENST00000343575 POU2F1P14859 743 aa13.37□□□□□ -0.27
CXCL12-201ENST00000343575 PTNP21246 168 aa13.37□□□□□ -0.27
CXCL12-201ENST00000343575 RCVRNP35243 200 aa13.37□□□□□ -0.27
CXCL12-201ENST00000343575 OR5M10Q6IEU7 315 aa13.37□□□□□ -0.27
CXCL12-201ENST00000343575 OPN5Q6U736 354 aa13.37□□□□□ -0.27
CXCL12-201ENST00000343575 SLC46A3Q7Z3Q1 461 aa13.37□□□□□ -0.27
CXCL12-201ENST00000343575 ZNF440Q8IYI8 595 aa13.37□□□□□ -0.27
CXCL12-201ENST00000343575 PARP16Q8N5Y8 322 aa13.37□□□□□ -0.27
CXCL12-201ENST00000343575 ATG16L2Q8NAA4 619 aa13.37□□□□□ -0.27
CXCL12-201ENST00000343575 AQP11Q8NBQ7 271 aa13.37□□□□□ -0.27
CXCL12-201ENST00000343575 IL17RDQ8NFM7 739 aa13.37□□□□□ -0.27
CXCL12-201ENST00000343575 C9orf43Q8TAL5 461 aaPredicted RBP13.37□□□□□ -0.27
CXCL12-201ENST00000343575 GABARAPL3Q9BY60 117 aa13.37□□□□□ -0.27
CXCL12-201ENST00000343575 TRIM2Q9C040 744 aa13.37□□□□□ -0.27
CXCL12-201ENST00000343575 NUAK2Q9H093 628 aa13.37□□□□□ -0.27
CXCL12-201ENST00000343575 CRNNQ9UBG3 495 aaPredicted RBP13.37□□□□□ -0.27
CXCL12-201ENST00000343575 PCDHGB6Q9Y5F9 930 aa13.37□□□□□ -0.27
CXCL12-201ENST00000343575 TLX3O43711 291 aaPredicted RBP13.36□□□□□ -0.27
CXCL12-201ENST00000343575 GMFGO60234 142 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 CCL3P10147 92 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 ANXA8P13928 327 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 IDH2P48735 452 aaKnown RBP13.36□□□□□ -0.27
CXCL12-201ENST00000343575 AIMP2Q13155 320 aaKnown RBP13.36□□□□□ -0.27
CXCL12-201ENST00000343575 TIGD6Q17RP2 521 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 PRICKLE2Q7Z3G6 844 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 MDGA2Q7Z553 956 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 MEX3DQ86XN8 651 aaKnown RBP13.36□□□□□ -0.27
CXCL12-201ENST00000343575 BEST3Q8N1M1 668 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 CADM2Q8N3J6 435 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 ASCC1Q8N9N2 400 aaKnown RBP13.36□□□□□ -0.27
CXCL12-201ENST00000343575 GRPEL2Q8TAA5 225 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 PAQR8Q8TEZ7 354 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 ACOT11Q8WXI4 607 aaPredicted RBP13.36□□□□□ -0.27
CXCL12-201ENST00000343575 ASB15Q8WXK1 588 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 RPL3LQ92901 407 aaKnown RBP13.36□□□□□ -0.27
CXCL12-201ENST00000343575 C3orf49Q96BT1 292 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 HRASLS5Q96KN8 279 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 FRMD6Q96NE9 622 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 COPS4Q9BT78 406 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 TMEM27Q9HBJ8 222 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 ATP13A2Q9NQ11 1180 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 WDR70Q9NW82 654 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 PSORS1C1Q9UIG5 152 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 TMCC3Q9ULS5 477 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 CFAP47Q6ZTR5 3102 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 A0A075B6Q4 140 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 CHP2O43745 196 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 PIP5K1CO60331 668 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 OR10H3O60404 316 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 TP53P04637 393 aaPredicted RBP13.36□□□□□ -0.27
CXCL12-201ENST00000343575 DDOSTP39656 456 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 NR4A2P43354 598 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 OMPP47874 163 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 CCR4P51679 360 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 UGT2B15P54855 530 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 NPRL3Q12980 569 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 COL28A1Q2UY09 1125 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 JMJD6Q6NYC1 403 aaPredicted RBP13.36□□□□□ -0.27
CXCL12-201ENST00000343575 C1orf94Q6P1W5 598 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 TMEM81Q6P7N7 255 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 KLHL17Q6TDP4 642 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 GDPD3Q7L5L3 318 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 TMEM156Q8N614 296 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 OR5W2Q8NH69 310 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 GPR119Q8TDV5 335 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 GTPBP3Q969Y2 492 aaKnown RBP13.36□□□□□ -0.27
CXCL12-201ENST00000343575 FER1L6-AS2Q96M78 137 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 CDADC1Q9BWV3 514 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 FKBP14Q9NWM8 211 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 ANKRD10Q9NXR5 420 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 REV1Q9UBZ9 1251 aa13.36□□□□□ -0.27
CXCL12-201ENST00000343575 CPAMD8Q8IZJ3 1885 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms