RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ZNF563Q8TA94 476 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 ITPKCQ96DU7 683 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 CTRCQ99895 268 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 OR51V1Q9H2C8 321 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 C14orf119Q9NWQ9 140 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 OCIAD1Q9NX40 245 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 ICAM5Q9UMF0 924 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 BAIAP2Q9UQB8 552 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 CMAHPQ9Y471 501 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 DMXL1Q9Y485 3027 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 TSPAN2O60636 221 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 PPM1BO75688 479 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 NDUFB2O95178 105 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 IGHA1P01876 353 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 PNMTP11086 282 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 PEPDP12955 493 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 SDC2P34741 201 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 ZNF117Q03924 483 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 CRMP1Q14194 572 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 ZNF791Q3KP31 576 aaPredicted RBP16.99■□□□□ 0.31
HOXA9-201ENST00000343483 ANKRD37Q7Z713 158 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 PTP4A1Q93096 173 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 ERMAPQ96PL5 475 aaPredicted RBP16.99■□□□□ 0.31
HOXA9-201ENST00000343483 PRRX2Q99811 253 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 KLHDC3Q9BQ90 382 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 TBL1XR1Q9BZK7 514 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 SMOC1Q9H4F8 434 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 TRAPPC4Q9Y296 219 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 GSTK1Q9Y2Q3 226 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 ADAMTS9Q9P2N4 1935 aa16.99■□□□□ 0.31
HOXA9-201ENST00000343483 IGKV1D-42A0A075B6H8 117 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 C17orf51A8MQB3 221 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 NDUFB5O43674 189 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 LALBAP00709 142 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 HK1P19367 917 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 MST1P26927 711 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 LCN1P31025 176 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 FABP5Q01469 135 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 ZNF528Q3MIS6 628 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 GXYLT1Q4G148 440 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 ARHGAP11AQ6P4F7 1023 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 ATG4DQ86TL0 474 aaPredicted RBP16.98■□□□□ 0.31
HOXA9-201ENST00000343483 OR8H2Q8N162 312 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 ZNF441Q8N8Z8 693 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 OR5M3Q8NGP4 307 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 METTL21AQ8WXB1 218 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 WDFY2Q96P53 400 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 MED18Q9BUE0 208 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 V9GYH0 126 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 MCIDASD6RGH6 385 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 AKAP8O43823 692 aaKnown RBP16.98■□□□□ 0.31
HOXA9-201ENST00000343483 ALOX12BO75342 701 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 RPL4P36578 427 aaKnown RBP16.98■□□□□ 0.31
HOXA9-201ENST00000343483 RNF4P78317 190 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 ZNF362Q5T0B9 420 aaPredicted RBP16.98■□□□□ 0.31
HOXA9-201ENST00000343483 C10orf53Q8N6V4 93 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 SYT14Q8NB59 555 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 SPRYD4Q8WW59 207 aaPredicted RBP16.98■□□□□ 0.31
HOXA9-201ENST00000343483 HPS1Q92902 700 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 ZNF524Q96C55 264 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 DEPDC7Q96QD5 511 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 ZNF649Q9BS31 505 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 SLC19A3Q9BZV2 496 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 LAT2Q9GZY6 243 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 ZNF337Q9Y3M9 751 aa16.98■□□□□ 0.31
HOXA9-201ENST00000343483 EP300Q09472 2414 aaPredicted RBP16.98■□□□□ 0.31
HOXA9-201ENST00000343483 KHNYNO15037 678 aaKnown RBP16.97■□□□□ 0.31
HOXA9-201ENST00000343483 GDF9O60383 454 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 OR7A10O76100 309 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 IFNGP01579 166 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 CLUP10909 449 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 ITPKBP27987 946 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 SLC23A3Q6PIS1 610 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 OVCH1Q7RTY7 1134 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 SLC43A2Q8N370 569 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 OR52N1Q8NH53 320 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 THAP3Q8WTV1 239 aaPredicted RBP16.97■□□□□ 0.31
HOXA9-201ENST00000343483 KISS1RQ969F8 398 aaPredicted RBP16.97■□□□□ 0.31
HOXA9-201ENST00000343483 PLEKHB1Q9UF11 243 aaPredicted RBP16.97■□□□□ 0.31
HOXA9-201ENST00000343483 FBXL4Q9UKA2 621 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 RIF1Q5UIP0 2472 aaKnown RBP16.97■□□□□ 0.31
HOXA9-201ENST00000343483 TRDV1A0A1B0GX56 115 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 SLC35F4A4IF30 521 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 SLC22A31A6NKX4 558 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 D6RAR5 112 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 SCO2O43819 266 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 NUDT14O95848 222 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 APOA1P02647 267 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 GYPBP06028 91 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 SYPP08247 313 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 FGF9P31371 208 aaPredicted RBP16.97■□□□□ 0.31
HOXA9-201ENST00000343483 EIF2B2P49770 351 aaKnown RBP16.97■□□□□ 0.31
HOXA9-201ENST00000343483 PNLIPRP2P54317 469 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 CD200R1LQ6Q8B3 271 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 C16orf47Q6ZP98 133 aaPredicted RBP16.97■□□□□ 0.31
HOXA9-201ENST00000343483 GDPD3Q7L5L3 318 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 FAM98AQ8NCA5 519 aaKnown RBP16.97■□□□□ 0.31
HOXA9-201ENST00000343483 C17orf47Q8NEP4 570 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 OR52E2Q8NGJ4 325 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 TBX5Q99593 518 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms