RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 NRIP3Q9NQ35 241 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 AKAP7Q9P0M2 348 aaPredicted RBP13.71□□□□□ -0.21
CLCN1-201ENST00000343257 PLEKHM1Q9Y4G2 1056 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 TMEM272A0A1B0GTI8 110 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 ANKRD20A5PA0PJZ0 165 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 C4orf51C9J302 202 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 CCSO14618 274 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 ABCD4O14678 606 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 TO15178 435 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 KLF4O43474 513 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 AKR7A3O95154 331 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 CPN1P15169 458 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 ITPKBP27987 946 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 ACADLP28330 430 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 GPR1P46091 355 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 TCEA2Q15560 299 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 DEFB115Q30KQ5 88 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 GXYLT1Q4G148 440 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 ZC3H14Q6PJT7 736 aaKnown RBP13.71□□□□□ -0.22
CLCN1-201ENST00000343257 OR52E2Q8NGJ4 325 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 SLC35A4Q96G79 324 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 VN1R3Q9BXE9 311 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 EMC3Q9P0I2 261 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 FOXJ3Q9UPW0 622 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 CCL26Q9Y258 94 aa13.71□□□□□ -0.22
CLCN1-201ENST00000343257 LATO43561 262 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 F3P13726 295 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 RPS11P62280 158 aaKnown RBP eCLIP13.7□□□□□ -0.22
CLCN1-201ENST00000343257 TRAM1Q15629 374 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 MANEAQ5SRI9 462 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 ZNF547Q8IVP9 402 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 OR51S1Q8NGJ8 323 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 OR4C16Q8NGL9 310 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 TFGQ92734 400 aaPredicted RBP13.7□□□□□ -0.22
CLCN1-201ENST00000343257 CPNE2Q96FN4 548 aaPredicted RBP13.7□□□□□ -0.22
CLCN1-201ENST00000343257 TMPRSS13Q9BYE2 586 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 CPEB1Q9BZB8 566 aaKnown RBP13.7□□□□□ -0.22
CLCN1-201ENST00000343257 CLDND1Q9NY35 253 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 CTSFQ9UBX1 484 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 OR5V1Q9UGF6 321 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 ZNF346Q9UL40 294 aaKnown RBP13.7□□□□□ -0.22
CLCN1-201ENST00000343257 HS3ST2Q9Y278 367 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 A0A1W2PRU2 124 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 OR6C68A6NDL8 312 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 IFITM5A6NNB3 132 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 ZNF806P0C7X5 589 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 SPP1P10451 314 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 FRKP42685 505 aaPredicted RBP13.7□□□□□ -0.22
CLCN1-201ENST00000343257 TAS2R43P59537 309 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 POLR2GP62487 172 aaKnown RBP eCLIP13.7□□□□□ -0.22
CLCN1-201ENST00000343257 SIRPAP78324 504 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 ELAVL2Q12926 359 aaKnown RBP13.7□□□□□ -0.22
CLCN1-201ENST00000343257 CDK5R1Q15078 307 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 TAF13Q15543 124 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 HFEQ30201 348 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 NAXDQ8IW45 347 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 OR1S2Q8NGQ3 325 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 AICDAQ9GZX7 198 aa13.7□□□□□ -0.22
CLCN1-201ENST00000343257 GRM6O15303 877 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 MAS1P04201 325 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 FBXO45P0C2W1 286 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 CERS1P27544 350 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 TAS2R20P59543 309 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 UNQ6126/PRO20091Q6UXV3 157 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 MAMSTRQ6ZN01 415 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 ZNF836Q6ZNA1 936 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 IFNL1Q8IU54 200 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 PM20D2Q8IYS1 436 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 OR6K6Q8NGW6 343 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 TCEAL4Q96EI5 215 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 TNFRSF13CQ96RJ3 184 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 EXO5Q9H790 373 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 CACYBPQ9HB71 228 aaKnown RBP13.69□□□□□ -0.22
CLCN1-201ENST00000343257 KLF2Q9Y5W3 355 aaPredicted RBP13.69□□□□□ -0.22
CLCN1-201ENST00000343257 TRAV1-2A0A0B4J238 106 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 NAP1L6A6NFF2 107 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 SGCEO43556 437 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 CSN2P05814 226 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 MPGP29372 298 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 ID2Q02363 134 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 RBMS2Q15434 407 aaKnown RBP13.69□□□□□ -0.22
CLCN1-201ENST00000343257 LIN54Q6MZP7 749 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 TMEM17Q86X19 198 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 CACUL1Q86Y37 369 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 TMEM239Q8WW34 195 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 SMIM19Q96E16 107 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 MS4A4EQ96PG1 132 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 MICU1Q9BPX6 476 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 MRPL17Q9NRX2 175 aaKnown RBP13.69□□□□□ -0.22
CLCN1-201ENST00000343257 FBXO4Q9UKT5 387 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 ZNF443Q9Y2A4 671 aaPredicted RBP13.69□□□□□ -0.22
CLCN1-201ENST00000343257 WDR45Q9Y484 360 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 LOC100509620A0A075B734 347 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 TRBV23-1A0A0A0MS06 115 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 HMSDA8MTL9 139 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 FAM25EA8MYX2 175 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 CTDSPLO15194 276 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 DPP4P27487 766 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 CAPZA2P47755 286 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 ELFN2Q5R3F8 820 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms